Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_J09
(789 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 25 1.1
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 24 1.9
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 24 1.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.4
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 2.4
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.2
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 5.7
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 5.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 5.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 5.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.9
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 643 ILPPVLRYLLETYGYKGAVLILGGI 569
I+P V+ ++ YG AVLI GG+
Sbjct: 55 IIPVVMAGIIAIYGLVVAVLIAGGL 79
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -3
Query: 565 LNVWAAALLFQPVEEHMVRKYKEN--QEEDC 479
L W L +QP+ +R+Y++N EDC
Sbjct: 100 LQQWNEDLNWQPIATKYLRRYEDNIFLPEDC 130
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -3
Query: 565 LNVWAAALLFQPVEEHMVRKYKEN--QEEDC 479
L W L +QP+ +R+Y++N EDC
Sbjct: 115 LQQWNEDLNWQPIATKYLRRYEDNIFLPEDC 145
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 454 VPLAGRPEDSPPP 492
+P++G PE PPP
Sbjct: 1851 IPVSGSPEPPPPP 1863
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 334 CWARCPGGRVHS 369
C AR P G VHS
Sbjct: 81 CLARSPAGSVHS 92
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = -3
Query: 226 HGSQETFSRRQSNAGPIRNYSTSSLAYISTPFHGSTLSAF 107
H + E+F + N +RN + +I P GS F
Sbjct: 363 HTASESFMKHYENEMRLRNGCPADWLWIVPPISGSATPVF 402
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 3.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 689 SGERDLHVGLRVRQHHPAPG 630
+G+ H GL HHP PG
Sbjct: 269 NGDMFCHTGLGHYGHHPDPG 288
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -3
Query: 649 SIILPPVLRYLLETYGYKGAVLILGGIMLN 560
S++LP + +YLL T+ +++ I++N
Sbjct: 290 SLVLPLIAKYLLFTFIMNTVSILVTVIIIN 319
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 454 VPLAGRPEDSPPPGFP 501
V L G P++ P PG P
Sbjct: 16 VSLYGTPKEEPGPGLP 31
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 454 VPLAGRPEDSPPPGFP 501
V L G P++ P PG P
Sbjct: 16 VSLYGTPKEEPGPGLP 31
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 454 VPLAGRPEDSPPPGFP 501
V L G P++ P PG P
Sbjct: 16 VSLYGTPKEEPGPGLP 31
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 269 ENAQSESEHVL-VQQTRLAGNLQQEAEQRRTDQE 171
+ Q +++HV+ QQ + QQ+ +Q++ Q+
Sbjct: 425 QQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQ 458
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 695 PWSGERDLHVGLR 657
P++ +RDLH+G R
Sbjct: 615 PFTADRDLHLGER 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,303
Number of Sequences: 438
Number of extensions: 4205
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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