Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_J05
         (768 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0502 + 24947444-24947665,24947768-24947823,24947929-249480...    29   4.1  
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311...    28   7.1  
05_03_0170 - 9132207-9133010,9133232-9133894                           28   7.1  
04_01_0044 + 489486-490012,490903-491332                               28   9.4  
03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007     28   9.4  

>03_05_0502 +
           24947444-24947665,24947768-24947823,24947929-24948099,
           24948508-24948631,24949086-24949142,24949216-24949312,
           24949619-24949826,24950637-24950697,24950793-24950846
          Length = 349

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 413 LGRAAGGAKLPSAGLXLNAXKAEASRAPPPPLR 315
           L  ++  ++L    L L+  ++ ASR+PPPPLR
Sbjct: 7   LSPSSSSSRLLLLRLLLSRRRSPASRSPPPPLR 39


>05_03_0645 +
           16529635-16529794,16530188-16530312,16531100-16531173,
           16531961-16532006,16532638-16532730,16534429-16535886
          Length = 651

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 416 ALGRAAGGAKLPSAGLXLNAXKAEASRAPPPPLRSL 309
           AL  +A GA   +AGL  ++  + A+ APPP   SL
Sbjct: 315 ALSSSAQGAVQGTAGLMASSATSAAAMAPPPSAPSL 350


>05_03_0170 - 9132207-9133010,9133232-9133894
          Length = 488

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 353 KAEASRAPPPPLRSLISNL--SNTCDLTPLPEWSCEQ 249
           +A ASR PP PLR  I  L   +T DL     W  E+
Sbjct: 205 EAHASRGPPRPLRRCIQGLDPKSTADLFSSAAWVGER 241


>04_01_0044 + 489486-490012,490903-491332
          Length = 318

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 398 GGAKLPSAGLXLNAXKAEASRAPPPPLRSLISNLSNTC 285
           GG     AGL L   +   SR PPPP+  +++ L  +C
Sbjct: 7   GGVAGAGAGLPLVLRRCNRSRTPPPPM--VMTPLHRSC 42


>03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007
          Length = 261

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 365 LNAXKAEASRAPPPPLRSLISNLSNTCDLT 276
           + A  A A+ APPPP R   +N+   C+ T
Sbjct: 1   MQAATAAAAAAPPPPRRHGYANVDPRCEWT 30


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,687,790
Number of Sequences: 37544
Number of extensions: 161041
Number of successful extensions: 646
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)