Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_I24
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0115 + 20944586-20945185 32 0.46
01_06_0146 + 26969011-26969995,26970878-26970930 31 1.4
07_03_1160 - 24430240-24431268 30 1.9
02_04_0203 - 20888010-20888162,20888242-20888469,20888969-208890... 30 2.5
12_01_0302 - 2286171-2286341,2286747-2286968 29 4.3
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.7
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.7
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 28 9.9
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917... 28 9.9
02_03_0229 + 16617371-16617970 28 9.9
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 28 9.9
>09_06_0115 + 20944586-20945185
Length = 199
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -2
Query: 728 PLXIKPPXPCDXRXHQPRSSNPPIPY-TNHPRLNIHFHQSSDAVLEGVRAGVKASVV 561
PL P P R H +S+PP P T+ P + +H +++DA + G+R + +V+
Sbjct: 36 PLPFLPDNPRLVRLHLRTTSSPPRPSPTDDPVVTLHAIRATDADVGGLRLSCQPAVL 92
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 713 PPXPCDXRXHQPRSSNPPIPYTNHP 639
PP P D R QPR++ PP P + P
Sbjct: 88 PPLPHDNRTPQPRAAPPPAPAPDQP 112
>07_03_1160 - 24430240-24431268
Length = 342
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 719 IKPPXPCDXRXHQPRSSNPPIPYTNHP 639
I P PC + QP+ PP+P N P
Sbjct: 99 IPPVQPCPDQPPQPKPDGPPLPNPNQP 125
>02_04_0203 -
20888010-20888162,20888242-20888469,20888969-20889073,
20889148-20889225,20889308-20889382,20890037-20890123,
20890216-20890283,20890396-20890483,20890583-20890683,
20890793-20890913,20891008-20891169,20891271-20891441
Length = 478
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 486 ENKGAKPLXPCPVTRG*DTLMEPSDDNGGFNPGADSF 596
E K A+P P PVT G P+DDN G P + F
Sbjct: 384 EKKEAEPT-PVPVTVGAAVASSPADDNNGAAPQPEPF 419
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 83 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 184
RL+R RK + D+ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 75 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 221
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -2
Query: 242 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 63
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 62 ILHSF 48
+LHSF
Sbjct: 1408 LLHSF 1412
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 671 SNPPIPYTNHPRLNIHFHQSSDAVLEGVRAGVKASVV 561
S+ I N +IHF S +A+ GVRAG+ S++
Sbjct: 172 SSSKIKLVNDLLESIHFIASIEAMFLGVRAGIHPSII 208
>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
26892215-26892266,26893530-26893795,26894007-26894229,
26895154-26895327,26895408-26895485,26895566-26895817,
26896138-26898204,26899477-26901322,26901474-26901574,
26902179-26902535,26902681-26902799,26903558-26903559,
26903630-26903662,26903709-26903841,26904285-26904537,
26905688-26905912,26906401-26906466,26907373-26907471,
26908528-26908545,26908546-26908893,26909878-26910354
Length = 2522
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = +3
Query: 540 TLMEPSDDNGGFNPG-ADS----F*YGVRGLMEMDVKSGVVGVWNRGI 668
TL EPSDD+ GFN AD+ F YG+R L ++ + V W GI
Sbjct: 1663 TLSEPSDDDDGFNVVLADNCQRIFVYGLRLLWTIENRDAVWS-WVGGI 1709
>02_03_0229 + 16617371-16617970
Length = 199
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -2
Query: 728 PLXIKPPXPCDXRXHQPRSSNPPIPY-TNHPRLNIHFHQSSDAVLEGVRAGVKASVV 561
PL P P R H S+PP P T+ P + +H +++A + G+R + +V+
Sbjct: 36 PLPFLPDNPRLVRLHLRTPSSPPRPTPTDDPVVTLHAICATNADVGGLRLSCQPAVL 92
>02_02_0718 -
13290764-13290897,13292375-13293041,13293364-13293719,
13294559-13294629,13295326-13295336
Length = 412
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 443 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 354
+P++L+SPP T+ IED + + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,714,241
Number of Sequences: 37544
Number of extensions: 417306
Number of successful extensions: 1180
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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