Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_I24
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical pr...    31   1.3  

>Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical
           protein T21B6.3 protein.
          Length = 821

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
 Frame = -3

Query: 691 GYINPDHQIPRFHTPTTPDLTSISINPLT------PY*KESAPGLKPPLSSEGSISVSHP 530
           G+  P  Q P+   PT P + +  IN  T      PY     P   PP + +G   V+ P
Sbjct: 393 GFCAPVPQAPQQERPTPPPVLAPVINTATQPPLPQPYPTRYRPAPPPPPACDGQGCVNPP 452

Query: 529 LVTG 518
           +V+G
Sbjct: 453 VVSG 456


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,603,164
Number of Sequences: 27780
Number of extensions: 314244
Number of successful extensions: 897
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)