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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_I22
         (765 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064621-1|AAH64621.1|  145|Homo sapiens VPS37D protein protein.       34   0.64 
AY081952-1|AAL91075.1|  289|Homo sapiens Williams-Beuren syndrom...    34   0.64 
CR536513-1|CAG38751.1|  545|Homo sapiens TRIP10 protein.               31   6.0  
BT020171-1|AAV43773.1|  545|Homo sapiens thyroid hormone recepto...    31   6.0  
BT020167-1|AAV38969.1|  545|Homo sapiens thyroid hormone recepto...    31   6.0  
BT006698-1|AAP35344.1|  545|Homo sapiens thyroid hormone recepto...    31   6.0  
BC103660-1|AAI03661.1|  544|Homo sapiens RBM15 protein protein.        31   6.0  
BC103507-1|AAI03508.1|  969|Homo sapiens RBM15 protein protein.        31   6.0  
BC103493-1|AAI03494.1|  969|Homo sapiens RBM15 protein protein.        31   6.0  
BC098140-1|AAH98140.1|  969|Homo sapiens RBM15 protein protein.        31   6.0  
BC062316-1|AAH62316.1|  957|Homo sapiens RBM15 protein protein.        31   6.0  
BC047479-1|AAH47479.1|  959|Homo sapiens RBM15 protein protein.        31   6.0  
BC013002-1|AAH13002.1|  545|Homo sapiens thyroid hormone recepto...    31   6.0  
BC006397-1|AAH06397.2|  957|Homo sapiens RBM15 protein protein.        31   6.0  
AL355488-1|CAI19077.1|  977|Homo sapiens RNA binding motif prote...    31   6.0  
AK223109-1|BAD96829.1|  545|Homo sapiens thyroid hormone recepto...    31   6.0  
AK025596-1|BAB15185.1|  532|Homo sapiens protein ( Homo sapiens ...    31   6.0  
AK022541-1|BAB14088.1|  925|Homo sapiens protein ( Homo sapiens ...    31   6.0  
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.              31   6.0  
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.              31   6.0  
AJ297259-2|CAC38862.1|  969|Homo sapiens one twenty two protein ...    31   6.0  
AJ297259-1|CAC38861.1|  957|Homo sapiens one twenty two protein ...    31   6.0  
AJ000414-1|CAA04062.1|  545|Homo sapiens Cdc42-interacting prote...    31   6.0  
AF502289-1|AAM46851.1|  601|Homo sapiens Cdc42-interaction prote...    31   6.0  
AF368064-1|AAK54724.1|  957|Homo sapiens putative RNA-binding mo...    31   6.0  
AF368063-1|AAK54723.1|  977|Homo sapiens putative RNA-binding mo...    31   6.0  
AF368062-1|AAK54722.1|  969|Homo sapiens putative RNA-binding mo...    31   6.0  

>BC064621-1|AAH64621.1|  145|Homo sapiens VPS37D protein protein.
          Length = 145

 Score = 33.9 bits (74), Expect = 0.64
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
 Frame = -2

Query: 743 LXRXQAETQSEXLXRRDRXTQXTLHPSRRPPNAGPAAASNMTAGSLG----RRAKSPIDS 576
           L R QAE   E L RR+R  Q     +  PP + PAAA   T  + G     R+  P+DS
Sbjct: 54  LRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDS 113


>AY081952-1|AAL91075.1|  289|Homo sapiens Williams-Beuren syndrome
           critical region protein 24 protein.
          Length = 289

 Score = 33.9 bits (74), Expect = 0.64
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
 Frame = -2

Query: 743 LXRXQAETQSEXLXRRDRXTQXTLHPSRRPPNAGPAAASNMTAGSLG----RRAKSPIDS 576
           L R QAE   E L RR+R  Q     +  PP + PAAA   T  + G     R+  P+DS
Sbjct: 198 LRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRSLPPLDS 257


>CR536513-1|CAG38751.1|  545|Homo sapiens TRIP10 protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = -2

Query: 728 AETQSEXLXRRDRXTQXTLHPSRRPPNAGPAAASNMTAGSLGRRAKSPIDSAAXHLPPER 549
           AE +S  L  R         P   P +A P ++SN  +      ++ P    +   P   
Sbjct: 413 AEAESRVLSNRGDSLSRHARPPDPPASAPPDSSSNSASQDTKESSEEPPSEESQDTPIYT 472

Query: 548 SRDRDLQRRPTS 513
             D D +  PTS
Sbjct: 473 EFDEDFEEEPTS 484


>BT020171-1|AAV43773.1|  545|Homo sapiens thyroid hormone receptor
           interactor 10 protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = -2

Query: 728 AETQSEXLXRRDRXTQXTLHPSRRPPNAGPAAASNMTAGSLGRRAKSPIDSAAXHLPPER 549
           AE +S  L  R         P   P +A P ++SN  +      ++ P    +   P   
Sbjct: 413 AEAESRVLSNRGDSLSRHARPPDPPASAPPDSSSNSASQDTKESSEEPPSEESQDTPIYT 472

Query: 548 SRDRDLQRRPTS 513
             D D +  PTS
Sbjct: 473 EFDEDFEEEPTS 484


>BT020167-1|AAV38969.1|  545|Homo sapiens thyroid hormone receptor
           interactor 10 protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = -2

Query: 728 AETQSEXLXRRDRXTQXTLHPSRRPPNAGPAAASNMTAGSLGRRAKSPIDSAAXHLPPER 549
           AE +S  L  R         P   P +A P ++SN  +      ++ P    +   P   
Sbjct: 413 AEAESRVLSNRGDSLSRHARPPDPPASAPPDSSSNSASQDTKESSEEPPSEESQDTPIYT 472

Query: 548 SRDRDLQRRPTS 513
             D D +  PTS
Sbjct: 473 EFDEDFEEEPTS 484


>BT006698-1|AAP35344.1|  545|Homo sapiens thyroid hormone receptor
           interactor 10 protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = -2

Query: 728 AETQSEXLXRRDRXTQXTLHPSRRPPNAGPAAASNMTAGSLGRRAKSPIDSAAXHLPPER 549
           AE +S  L  R         P   P +A P ++SN  +      ++ P    +   P   
Sbjct: 413 AEAESRVLSNRGDSLSRHARPPDPPASAPPDSSSNSASQDTKESSEEPPSEESQDTPIYT 472

Query: 548 SRDRDLQRRPTS 513
             D D +  PTS
Sbjct: 473 EFDEDFEEEPTS 484


>BC103660-1|AAI03661.1|  544|Homo sapiens RBM15 protein protein.
          Length = 544

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 117 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 163


>BC103507-1|AAI03508.1|  969|Homo sapiens RBM15 protein protein.
          Length = 969

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


>BC103493-1|AAI03494.1|  969|Homo sapiens RBM15 protein protein.
          Length = 969

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


>BC098140-1|AAH98140.1|  969|Homo sapiens RBM15 protein protein.
          Length = 969

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


>BC062316-1|AAH62316.1|  957|Homo sapiens RBM15 protein protein.
          Length = 957

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 522 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 568


>BC047479-1|AAH47479.1|  959|Homo sapiens RBM15 protein protein.
          Length = 959

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 532 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 578


>BC013002-1|AAH13002.1|  545|Homo sapiens thyroid hormone receptor
           interactor 10 protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = -2

Query: 728 AETQSEXLXRRDRXTQXTLHPSRRPPNAGPAAASNMTAGSLGRRAKSPIDSAAXHLPPER 549
           AE +S  L  R         P   P +A P ++SN  +      ++ P    +   P   
Sbjct: 413 AEAESRVLSNRGDSLSRHARPPDPPASAPPDSSSNSASQDTKESSEEPPSEESQDTPIYT 472

Query: 548 SRDRDLQRRPTS 513
             D D +  PTS
Sbjct: 473 EFDEDFEEEPTS 484


>BC006397-1|AAH06397.2|  957|Homo sapiens RBM15 protein protein.
          Length = 957

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 522 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 568


>AL355488-1|CAI19077.1|  977|Homo sapiens RNA binding motif protein
           15 protein.
          Length = 977

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


>AK223109-1|BAD96829.1|  545|Homo sapiens thyroid hormone receptor
           interactor 10 variant protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = -2

Query: 728 AETQSEXLXRRDRXTQXTLHPSRRPPNAGPAAASNMTAGSLGRRAKSPIDSAAXHLPPER 549
           AE +S  L  R         P   P +A P ++SN  +      ++ P    +   P   
Sbjct: 413 AEAESRVLSNRGDSLSRHARPPDPPASAPPDSSSNSASQDTKESSEEPPSEESQDTPIYT 472

Query: 548 SRDRDLQRRPTS 513
             D D +  PTS
Sbjct: 473 EFDEDFEEEPTS 484


>AK025596-1|BAB15185.1|  532|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21943 fis, clone HEP04547. ).
          Length = 532

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 117 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 163


>AK022541-1|BAB14088.1|  925|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12479 fis, clone NT2RM1001059, weakly similar to
           NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ).
          Length = 925

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 498 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 544


>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
          Length = 1883

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
          Length = 1905

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


>AJ297259-2|CAC38862.1|  969|Homo sapiens one twenty two protein
           protein.
          Length = 969

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


>AJ297259-1|CAC38861.1|  957|Homo sapiens one twenty two protein
           protein.
          Length = 957

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


>AJ000414-1|CAA04062.1|  545|Homo sapiens Cdc42-interacting protein
           4 protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = -2

Query: 728 AETQSEXLXRRDRXTQXTLHPSRRPPNAGPAAASNMTAGSLGRRAKSPIDSAAXHLPPER 549
           AE +S  L  R         P   P +A P ++SN  +      ++ P    +   P   
Sbjct: 413 AEAESRVLSNRGDSLSRHARPPDPPASAPPDSSSNSASQDTKESSEEPPSEESQDTPIYT 472

Query: 548 SRDRDLQRRPTS 513
             D D +  PTS
Sbjct: 473 EFDEDFEEEPTS 484


>AF502289-1|AAM46851.1|  601|Homo sapiens Cdc42-interaction protein
           4 long isoform protein.
          Length = 601

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = -2

Query: 728 AETQSEXLXRRDRXTQXTLHPSRRPPNAGPAAASNMTAGSLGRRAKSPIDSAAXHLPPER 549
           AE +S  L  R         P   P +A P ++SN  +      ++ P    +   P   
Sbjct: 469 AEAESRVLSNRGDSLSRHARPPDPPASAPPDSSSNSASQDTKESSEEPPSEESQDTPIYT 528

Query: 548 SRDRDLQRRPTS 513
             D D +  PTS
Sbjct: 529 EFDEDFEEEPTS 540


>AF368064-1|AAK54724.1|  957|Homo sapiens putative RNA-binding motif
           protein 15 long form protein.
          Length = 957

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


>AF368063-1|AAK54723.1|  977|Homo sapiens putative RNA-binding motif
           protein 15 short form plus alternative exon protein.
          Length = 977

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


>AF368062-1|AAK54722.1|  969|Homo sapiens putative RNA-binding motif
           protein 15 short form protein.
          Length = 969

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 641 PAAASNMTAGSLGRRAKSPIDSAAXHLPPERSRDRDLQRRPTSRFLP 501
           P     +   + G RA  P+  A    PP   RDRD    P S ++P
Sbjct: 542 PLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVP 588


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,264,193
Number of Sequences: 237096
Number of extensions: 2570295
Number of successful extensions: 5351
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5343
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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