Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_I22
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p...    28   6.3  

>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
 Frame = -2

Query: 737 RXQAETQSEXLXRRDRXTQXTLHPS---RRPPNAGPAAASNMTAGSLGRRAKSPIDSAAX 567
           R ++ ++S    RR R    +  P+   RR P+  P A     + S G +++SP    + 
Sbjct: 426 RAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRRRSPS-GSKSRSPRRRRSP 484

Query: 566 HLPPERSRDRDLQRRPTSRFLPTQSGWS 483
              P R +    +R P  R  P+ S  S
Sbjct: 485 AAAPRRRQSPQRRRSPRRRRSPSSSSRS 512


>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
           protein T05C12.10 protein.
          Length = 1169

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 576 TINRALGPSTEGTGGHVAGGRRSGVWGTAG 665
           T+N A G ST GTG     G  SG+ G+AG
Sbjct: 364 TVNGAGGVSTTGTGAQT--GNESGLGGSAG 391


>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
           protein T05C12.10 protein.
          Length = 1169

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 576 TINRALGPSTEGTGGHVAGGRRSGVWGTAG 665
           T+N A G ST GTG     G  SG+ G+AG
Sbjct: 364 TVNGAGGVSTTGTGAQT--GNESGLGGSAG 391


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,500,425
Number of Sequences: 27780
Number of extensions: 368770
Number of successful extensions: 827
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)