Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_I11
         (776 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF428250-1|AAL30664.1| 1205|Homo sapiens partitioning-defective ...    27   7.3  
AB092439-1|BAC54285.1| 1205|Homo sapiens PAR3 beta alternatively...    27   7.3  
AF428251-1|AAL30665.1| 1143|Homo sapiens partitioning-defective ...    27   7.3  
AF466152-1|AAL79827.1| 1136|Homo sapiens partitioning-defective ...    27   7.3  
AB073472-1|BAC54035.1| 1104|Homo sapiens PAR3 beta protein.            27   7.3  
AC007385-2|AAX76515.1|  190|Homo sapiens unknown protein.              27   8.5  

>AF428250-1|AAL30664.1| 1205|Homo sapiens partitioning-defective
            3-like protein splice variant a protein.
          Length = 1205

 Score = 26.6 bits (56), Expect(2) = 7.3
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 613  PPAEPEHRRIARHERTGR 560
            PP+ P+H+R+  ++ TGR
Sbjct: 1160 PPSPPQHQRMPAYQETGR 1177



 Score = 22.2 bits (45), Expect(2) = 7.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 676  GSQPRTLVKHAQARTSPENLHPPAEPEHR 590
            GS PR           P++  PP  P+H+
Sbjct: 1124 GSYPRPTELRVADLRYPQHYPPPPAPQHK 1152


>AB092439-1|BAC54285.1| 1205|Homo sapiens PAR3 beta alternatively
            spliced form protein.
          Length = 1205

 Score = 26.6 bits (56), Expect(2) = 7.3
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 613  PPAEPEHRRIARHERTGR 560
            PP+ P+H+R+  ++ TGR
Sbjct: 1160 PPSPPQHQRMPAYQETGR 1177



 Score = 22.2 bits (45), Expect(2) = 7.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 676  GSQPRTLVKHAQARTSPENLHPPAEPEHR 590
            GS PR           P++  PP  P+H+
Sbjct: 1124 GSYPRPTELRVADLRYPQHYPPPPAPQHK 1152


>AF428251-1|AAL30665.1| 1143|Homo sapiens partitioning-defective
            3-like protein splice variant b protein.
          Length = 1143

 Score = 26.6 bits (56), Expect(2) = 7.3
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 613  PPAEPEHRRIARHERTGR 560
            PP+ P+H+R+  ++ TGR
Sbjct: 1098 PPSPPQHQRMPAYQETGR 1115



 Score = 22.2 bits (45), Expect(2) = 7.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 676  GSQPRTLVKHAQARTSPENLHPPAEPEHR 590
            GS PR           P++  PP  P+H+
Sbjct: 1062 GSYPRPTELRVADLRYPQHYPPPPAPQHK 1090


>AF466152-1|AAL79827.1| 1136|Homo sapiens partitioning-defective
            3-like protein splice variant c protein.
          Length = 1136

 Score = 26.6 bits (56), Expect(2) = 7.3
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 613  PPAEPEHRRIARHERTGR 560
            PP+ P+H+R+  ++ TGR
Sbjct: 1091 PPSPPQHQRMPAYQETGR 1108



 Score = 22.2 bits (45), Expect(2) = 7.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 676  GSQPRTLVKHAQARTSPENLHPPAEPEHR 590
            GS PR           P++  PP  P+H+
Sbjct: 1055 GSYPRPTELRVADLRYPQHYPPPPAPQHK 1083


>AB073472-1|BAC54035.1| 1104|Homo sapiens PAR3 beta protein.
          Length = 1104

 Score = 26.6 bits (56), Expect(2) = 7.3
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 613  PPAEPEHRRIARHERTGR 560
            PP+ P+H+R+  ++ TGR
Sbjct: 1059 PPSPPQHQRMPAYQETGR 1076



 Score = 22.2 bits (45), Expect(2) = 7.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 676  GSQPRTLVKHAQARTSPENLHPPAEPEHR 590
            GS PR           P++  PP  P+H+
Sbjct: 1023 GSYPRPTELRVADLRYPQHYPPPPAPQHK 1051


>AC007385-2|AAX76515.1|  190|Homo sapiens unknown protein.
          Length = 190

 Score = 26.6 bits (56), Expect(2) = 8.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 613 PPAEPEHRRIARHERTGR 560
           PP+ P+H+R+  ++ TGR
Sbjct: 145 PPSPPQHQRMPAYQETGR 162



 Score = 22.2 bits (45), Expect(2) = 8.5
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 676 GSQPRTLVKHAQARTSPENLHPPAEPEHR 590
           GS PR           P++  PP  P+H+
Sbjct: 109 GSYPRPTELRVADLRYPQHYPPPPAPQHK 137


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,158,229
Number of Sequences: 237096
Number of extensions: 2148308
Number of successful extensions: 5382
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5382
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)