Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_H24
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1075 - 30174725-30175363                                         29   3.8  
08_01_0059 - 394001-394708                                             29   5.0  
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    29   6.7  
12_02_1174 - 26696869-26698191                                         28   8.8  
02_05_0686 - 30900748-30902167,30903442-30904742                       28   8.8  
02_02_0663 - 12740733-12741104,12741260-12741326,12741709-127418...    28   8.8  
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896...    28   8.8  

>03_05_1075 - 30174725-30175363
          Length = 212

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +3

Query: 381 HXXPPRXPXPPXXXXPXPAXAXXRPPP 461
           H  PP  P PP    P P     +PPP
Sbjct: 83  HIAPPGAPAPPRLFEPLPEPLLPQPPP 109


>08_01_0059 - 394001-394708
          Length = 235

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 390 PPRXPXPPXXXXPXPAXAXXRPPP 461
           PP  P PP    P P     RPPP
Sbjct: 13  PPATPPPPPRRAPPPPSPPIRPPP 36


>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
            29334956-29335045,29335120-29335155,29335222-29336553,
            29337331-29337497,29337519-29337724,29337815-29338036,
            29338332-29338381,29338754-29338870,29339471-29339551,
            29339656-29339694,29340464-29340636,29340769-29340826,
            29340934-29340987,29341066-29341613,29341695-29341755,
            29342180-29342260,29342448-29342630,29342908-29343162,
            29343304-29343423,29343497-29344901,29344988-29345085,
            29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +3

Query: 381  HXXPPRXPXPPXXXXPXPAXAXXRPPPXXA 470
            H  PP  P PP    P P      PPP  A
Sbjct: 1929 HAPPPPPPPPPVEGKPKPPPHAPPPPPPEA 1958


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = +3

Query: 381 HXXPPRXPXPPXXXXPXPAXAXXRPPPXXAS 473
           H  PP  P PP    P P      PPP   S
Sbjct: 139 HRPPPVKPQPPPSLPPPPPPPPPPPPPRPPS 169


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 16/59 (27%), Positives = 16/59 (27%)
 Frame = +3

Query: 390 PPRXPXPPXXXXPXPAXAXXRPPPXXASHXXXXCPXXXXXXXPXSPXGXSXXXPXXXGG 566
           PP  P  P    P P       PP          P       P  P G S   P   GG
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372


>02_02_0663 -
           12740733-12741104,12741260-12741326,12741709-12741809,
           12741852-12742273,12743678-12743685,12745164-12745396
          Length = 400

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 390 PPRXPXPPXXXXPXPAXAXXRPPP 461
           PP  P PP    P PA     PPP
Sbjct: 48  PPYLPPPPPYPIPQPARPRAAPPP 71


>01_01_1130 +
           8959909-8960396,8960588-8960638,8960736-8960827,
           8960964-8961054,8961877-8961937,8962172-8962216,
           8962318-8962391,8962565-8962637,8963288-8963345,
           8963398-8963468,8963801-8963837,8964040-8964128,
           8964207-8964263,8964366-8964449,8964529-8964627,
           8964765-8964869,8965145-8965216,8965308-8965497,
           8965810-8966207
          Length = 744

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +3

Query: 390 PPRXPXPPXXXXPXPAXAXXRPPPXXA 470
           PP  P PP    P P      PPP  A
Sbjct: 76  PPTPPSPPPPPPPPPTNGTLTPPPSSA 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,566,082
Number of Sequences: 37544
Number of extensions: 154364
Number of successful extensions: 808
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)