Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_H10
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    29   5.0  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    29   5.0  
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = -2

Query: 670  IIKSPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSP 491
            ++    S+  PP    P P+  +           + P+++EAP+A   PS   + +G SP
Sbjct: 1167 VVAPSPSVIPPPILPPPPPAGVIGQQRNPIGGARQVPVAAEAPAAAAAPSRARVPRGPSP 1226

Query: 490  P 488
            P
Sbjct: 1227 P 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = -2

Query: 670  IIKSPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSP 491
            ++    S+  PP    P P+  +           + P+++EAP+A   PS   + +G SP
Sbjct: 1167 VVAPSPSVIPPPILPPPPPAGVIGQQRNPIGGARQVPVAAEAPAAAAAPSRARVPRGPSP 1226

Query: 490  P 488
            P
Sbjct: 1227 P 1227


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = -2

Query: 697 PCDXGYINPIIKSPDSIHQP--PQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPS-AYLT 527
           P +  + +P   SP S   P  P   +P PS P   Y  E A  + PP   E PS  Y  
Sbjct: 357 PQEPAHPSPSYPSP-SYPSPSYPSPSYPSPSYPSPSYPAEPAYSVPPPAKPEQPSGGYDA 415

Query: 526 PS 521
           PS
Sbjct: 416 PS 417


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,957,029
Number of Sequences: 27780
Number of extensions: 327888
Number of successful extensions: 981
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)