Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_G24
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 272 2e-73
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 272 2e-73
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 272 2e-73
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 272 2e-73
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 272 2e-73
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 272 2e-73
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 268 3e-72
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 268 3e-72
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 29 5.0
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 272 bits (666), Expect = 2e-73
Identities = 129/187 (68%), Positives = 149/187 (79%)
Frame = -3
Query: 656 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 477
QDEMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQK
Sbjct: 213 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
Query: 476 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 297
G+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M
Sbjct: 273 GFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIM 329
Query: 296 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 117
++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG L
Sbjct: 330 LRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKL 389
Query: 116 KKDRIRE 96
K+D + E
Sbjct: 390 KRDFLAE 396
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -2
Query: 732 GTIEDKVKWAREHLEKPIPVDSVFA 658
GTIE KV WAREHLEK + VD+VFA
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFA 212
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 272 bits (666), Expect = 2e-73
Identities = 129/187 (68%), Positives = 149/187 (79%)
Frame = -3
Query: 656 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 477
QDEMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQK
Sbjct: 213 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
Query: 476 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 297
G+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M
Sbjct: 273 GFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIM 329
Query: 296 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 117
++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG L
Sbjct: 330 LRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKL 389
Query: 116 KKDRIRE 96
K+D + E
Sbjct: 390 KRDFLAE 396
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -2
Query: 732 GTIEDKVKWAREHLEKPIPVDSVFA 658
GTIE KV WAREHLEK + VD+VFA
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFA 212
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 272 bits (666), Expect = 2e-73
Identities = 129/187 (68%), Positives = 149/187 (79%)
Frame = -3
Query: 656 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 477
QDEMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQK
Sbjct: 115 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 174
Query: 476 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 297
G+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M
Sbjct: 175 GFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIM 231
Query: 296 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 117
++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG L
Sbjct: 232 LRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKL 291
Query: 116 KKDRIRE 96
K+D + E
Sbjct: 292 KRDFLAE 298
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -2
Query: 732 GTIEDKVKWAREHLEKPIPVDSVFA 658
GTIE KV WAREHLEK + VD+VFA
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFA 114
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 272 bits (666), Expect = 2e-73
Identities = 129/187 (68%), Positives = 149/187 (79%)
Frame = -3
Query: 656 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 477
QDEMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQK
Sbjct: 213 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
Query: 476 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 297
G+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M
Sbjct: 273 GFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIM 329
Query: 296 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 117
++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG L
Sbjct: 330 LRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKL 389
Query: 116 KKDRIRE 96
K+D + E
Sbjct: 390 KRDFLAE 396
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -2
Query: 732 GTIEDKVKWAREHLEKPIPVDSVFA 658
GTIE KV WAREHLEK + VD+VFA
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFA 212
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 272 bits (666), Expect = 2e-73
Identities = 129/187 (68%), Positives = 149/187 (79%)
Frame = -3
Query: 656 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 477
QDEMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQK
Sbjct: 115 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 174
Query: 476 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 297
G+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M
Sbjct: 175 GFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIM 231
Query: 296 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 117
++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG L
Sbjct: 232 LRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKL 291
Query: 116 KKDRIRE 96
K+D + E
Sbjct: 292 KRDFLAE 298
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -2
Query: 732 GTIEDKVKWAREHLEKPIPVDSVFA 658
GTIE KV WAREHLEK + VD+VFA
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFA 114
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 272 bits (666), Expect = 2e-73
Identities = 129/187 (68%), Positives = 149/187 (79%)
Frame = -3
Query: 656 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 477
QDEMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQK
Sbjct: 213 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
Query: 476 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 297
G+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M
Sbjct: 273 GFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIM 329
Query: 296 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 117
++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG L
Sbjct: 330 LRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKL 389
Query: 116 KKDRIRE 96
K+D + E
Sbjct: 390 KRDFLAE 396
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -2
Query: 732 GTIEDKVKWAREHLEKPIPVDSVFA 658
GTIE KV WAREHLEK + VD+VFA
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFA 212
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 268 bits (657), Expect = 3e-72
Identities = 128/193 (66%), Positives = 150/193 (77%)
Frame = -3
Query: 674 SILCLPQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTV 495
SI + +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTV
Sbjct: 159 SIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 218
Query: 494 ARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEV 315
ARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG V
Sbjct: 219 ARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIV 275
Query: 314 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 135
N D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K
Sbjct: 276 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 335
Query: 134 AFMGTLKKDRIRE 96
AFMG LK+D + E
Sbjct: 336 AFMGKLKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 268 bits (657), Expect = 3e-72
Identities = 128/193 (66%), Positives = 150/193 (77%)
Frame = -3
Query: 674 SILCLPQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTV 495
SI + +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTV
Sbjct: 159 SIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 218
Query: 494 ARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEV 315
ARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG V
Sbjct: 219 ARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIV 275
Query: 314 NNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKA 135
N D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K
Sbjct: 276 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 335
Query: 134 AFMGTLKKDRIRE 96
AFMG LK+D + E
Sbjct: 336 AFMGKLKRDFLAE 348
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 593 RWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 432
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,538,024
Number of Sequences: 27780
Number of extensions: 407138
Number of successful extensions: 1090
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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