Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_G19
(794 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 76 5e-15
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 52 1e-07
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 48 2e-06
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 40 3e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 39 0.001
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 33 0.062
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 32 0.11
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 31 0.14
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 30 0.33
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 30 0.44
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 30 0.44
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 29 1.0
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 29 1.0
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 28 1.3
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 28 1.8
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 27 2.3
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 27 3.1
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 27 4.1
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 27 4.1
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 27 4.1
SPCC1739.10 |mug33||conserved fungal protein|Schizosaccharomyces... 26 7.1
SPBC23G7.10c |||NADH-dependent flavin oxidoreductase |Schizosacc... 25 9.4
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 25 9.4
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 76.2 bits (179), Expect = 5e-15
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Frame = -1
Query: 572 TRLQLD------GQHVTALQCIKRIYAKSGIRGFYKGITASYMGISETVVHFVLYE---- 423
TRLQLD Q+ +++ CI + G RG YKG++AS +G+ E+ + +VLYE
Sbjct: 188 TRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVGESTLQWVLYEKFKH 247
Query: 422 GVKARLIAARSVDGVASDQRSPRDFIEFMGAGAFSKTVASCIAYPHEVARTRLREEGD-- 249
V R + + + + D+ +G +K +A+ IAYPHEV RTRLR+
Sbjct: 248 AVAIRQLRRKELGIQETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTRLRQSPSIN 307
Query: 248 ---KYRKFWQTLHTVWMEEG 198
KY Q VWME+G
Sbjct: 308 GTPKYTGLIQCFKLVWMEQG 327
Score = 30.7 bits (66), Expect = 0.25
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = -2
Query: 769 AXFXGXGPNIVGGXXXRXXNXXTYSXX*SNFXIRIYHLTHRSFI-CRXRVQPGFVSCTMT 593
A F G GPN++G R N +Y + S I G ++ T
Sbjct: 121 ALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQENSQIHLMAAAIAGVITSAAT 180
Query: 592 NPIWFVK 572
NPIW VK
Sbjct: 181 NPIWLVK 187
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 536 LQCIKRIYAKSGIRGFYKGITASYMGI 456
+QC K ++ + GI G Y G+TA + +
Sbjct: 316 IQCFKLVWMEQGIVGLYGGLTAHLLRV 342
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 52.0 bits (119), Expect = 1e-07
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Frame = -1
Query: 524 KRIYAKSGIRGFYKGITASYMGISETVVHFVLYEGVKARLIAARSVDGVASDQRSPRDFI 345
++IY G+ FY+G+ S G + F LYE K+ L D +
Sbjct: 238 RKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL----------DDFFGKKSNF 287
Query: 344 EFMGAGAFSKTVASCIAYPHEVARTRLRE-EGDKYRKFWQTLHTVWMEEGXPWSLQGSGN 168
+ A SK AS + YPHEV RTRL+ + + + +W EG W SG
Sbjct: 288 HIVLAATLSKIAASTVTYPHEVLRTRLQSLDAPTHNSATLLIRDIWRSEG--WRKYYSGM 345
Query: 167 AAS 159
A +
Sbjct: 346 ATN 348
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2
Query: 616 GFVSCTMTNPIWFVK 572
G S T+TNPIW VK
Sbjct: 144 GAASVTLTNPIWVVK 158
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 47.6 bits (108), Expect = 2e-06
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = -1
Query: 554 GQHVTA--LQCIKRIYAKSGIRGFYKGITASYMGI-SETVVHFVLYEGVKARLIA-ARSV 387
GQH + L K +Y GIRG+Y+G+ +G+ + +EG+K I S
Sbjct: 264 GQHGKSIILSNAKELYKSVGIRGYYRGVLVGILGMFPYSATDLGTFEGLKRTWIGILASR 323
Query: 386 DGV-ASDQRSPRDFIEFMGAGAFSKTVASCIAYPHEVARTRLREEG 252
D V D + P + M GA S + + I +P V RTRL+ +G
Sbjct: 324 DNVDPQDVKLPNGLV--MAFGALSGSTGATIVFPLNVIRTRLQTQG 367
Score = 29.9 bits (64), Expect = 0.44
Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 536 LQCIKRIYAKSGIRGFYKGITASYMGISETV-VHFVLYEGVK 414
+ C + G RG YKG++ + + ++ +V + +++YE K
Sbjct: 379 IDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCK 420
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -2
Query: 223 FIQCGWK----KDXRGVYRGLGTQLVRQIPNTAI 134
FI C +K + RG+Y+GL L++ P+ AI
Sbjct: 378 FIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAI 411
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 40.3 bits (90), Expect = 3e-04
Identities = 29/102 (28%), Positives = 45/102 (44%)
Frame = -1
Query: 503 GIRGFYKGITASYMGISETVVHFVLYEGVKARLIAARSVDGVASDQRSPRDFIEFMGAGA 324
G+RG Y G S +G+S+ + F+ YE +K QR P ++++ A
Sbjct: 148 GLRGCYAGFAPSLLGVSQGALQFMAYEKLK------------LWKQRRPTS-LDYIFMSA 194
Query: 323 FSKTVASCIAYPHEVARTRLREEGDKYRKFWQTLHTVWMEEG 198
SK A+ YP V RTRL+ +R + W +G
Sbjct: 195 ASKVFAAVNMYPLLVIRTRLQVMRSPHRSIMNLVLQTWRLQG 236
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 38.7 bits (86), Expect = 0.001
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Frame = -1
Query: 539 ALQCIKRIYAKSGIRGFYKGITASYMGISETV-VHFVLYEGVKARLIAARSVDGVASDQR 363
AL C+K+I G+ FYKG +GI V + F +E K S DG
Sbjct: 58 ALDCVKKISKNEGLAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFF----SRDG------ 107
Query: 362 SPRDFIEFMGAGAFSKTVASCIAYPHEVARTRLREEGDK---YRKFWQTLHTVWMEEGXP 192
+P ++ +GA S S + P E R RL+ + K Y W + + + G
Sbjct: 108 TPVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQTGKNVLYHGPWDCIKKISSQYGLS 167
Query: 191 WSLQG-SGNAASEA 153
++G + AA EA
Sbjct: 168 GIMKGYNPTAAREA 181
Score = 36.3 bits (80), Expect = 0.005
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 533 QCIKRIYAKSGIRGFYKG-ITASYMGISETVVHFVLYEGVKARL 405
QC K IY K+G+RGFY+G + V F +YE V +
Sbjct: 256 QCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVTFYVYETVSQHI 299
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 32.7 bits (71), Expect = 0.062
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = -1
Query: 569 RLQLDGQHVTALQCIKRIYAKSGIRGFYKGI-TASYMGISETVVHFVLYEGVKARLIAAR 393
++Q + ++ + + +I+ + G+ GF++G T V F + +K R + R
Sbjct: 49 QVQNNKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNR 108
Query: 392 SVDGVASDQRSPRDFIEFMGAGAFSKTVASCIAYPHEVARTRLREE 255
S + + +R + GA + + YP ++ARTRL E
Sbjct: 109 SHQNLENHER--------LLFGAIAGAASCATTYPLDIARTRLSIE 146
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 31.9 bits (69), Expect = 0.11
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Frame = -1
Query: 506 SGIRGFYKGITASYMGISETV-VHFVLYEGVKARLIAARSVDGVASDQRSPRDFIEF--M 336
S I FY+G + + GI + F+ Y+ + + +D S ++S + + +
Sbjct: 182 SKICNFYRGFSVTLTGIFPYAGMSFLAYD-LATDFFHKQKIDEWVSTKKSDKKLKTWPEL 240
Query: 335 GAGAFSKTVASCIAYPHEVARTRLREEGDKYRKFW----QTLHTVWMEEG 198
GAF+ ++YP EV R +++ G + K + Q + T + E G
Sbjct: 241 LCGAFAGVCGQTVSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQTTYKEAG 290
Score = 31.9 bits (69), Expect = 0.11
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = -1
Query: 581 VC*TRLQLDG-----QHVTALQCIKRIYAKSGIRGFYKGITASYMGISETV-VHFVLYEG 420
VC ++Q+ G + Q ++ Y ++G+RGF+ G+T Y+ + V F +Y
Sbjct: 259 VCRRKMQIGGIRKNKSFLRLKQVVQTTYKEAGMRGFFVGLTIGYIKVIPMVSTSFFVYNH 318
Query: 419 VKARL 405
KA L
Sbjct: 319 SKALL 323
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 31.5 bits (68), Expect = 0.14
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 307 ATVFEKAPAPMNSMKSRGDLWSLATPSTLRAAISRAFTPSYSTKWTT 447
++V A +S+ + S +TP T+ ++ +FTPSYST TT
Sbjct: 231 SSVISSASLSSSSVLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTT 277
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 30.3 bits (65), Expect = 0.33
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 536 LQCIKRIYAKSGIRGFYKGITASYMGISETV-VHFVLYEGVKARL 405
L K+IYA++GI+GF+ G+ S + I F+ Y +A L
Sbjct: 142 LPATKKIYAEAGIKGFFPGLKFSVIQIGPYAGCFFMFYRASEAVL 186
Score = 29.5 bits (63), Expect = 0.58
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 530 CIKRIYAKSGIRGFYKGITASYMGIS 453
C IY SGI+G Y+G++ S + ++
Sbjct: 233 CFLSIYRNSGIKGLYRGLSVSMLKVA 258
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 29.9 bits (64), Expect = 0.44
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = -1
Query: 521 RIYAKSGIRGFYKGITASYMGISET-VVHFVLYEGVKARLIAARSVDGVASDQRSPRDFI 345
+I + G+ ++GI++ MG + ++F + E K+++ A SP +
Sbjct: 67 KISSTEGVYSLWRGISSVIMGAGPSHAIYFSVLEFFKSKINA------------SPDRPL 114
Query: 344 EFMGAGAFSKTVASCIAYPHEVARTRLREEGDKYRKFWQTLHTVWMEEG 198
AGA + T++ P +V + R++ KY+ TV+ EG
Sbjct: 115 ASALAGACAITISDAFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEG 163
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 29.9 bits (64), Expect = 0.44
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Frame = -1
Query: 527 IKRIYAKSGIRGFYKG----ITASYMGISETVVHFVLYEGVKARL 405
++RIY ++GI GF KG + AS +G+S ++ YE VK+ L
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLS---IYLGTYEHVKSHL 247
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 203 LPSTLYEEFARISDTYHLLLSIAFLLP 283
LP LYE+F + Y LL+S++ L+P
Sbjct: 105 LPKCLYEQFRYFYNMYFLLVSLSQLIP 131
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 536 LQCIKRIYAKSGIRGFYKGITASY-MGISETVVHFVLYEGVKARL 405
LQ + I ++GIRG Y+G+ A+ + + V F Y +K L
Sbjct: 147 LQASRIIVHENGIRGLYRGLAATVARQAANSGVRFTAYNSIKQSL 191
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Frame = -2
Query: 193 RGVYRGLGTQLVRQIPNTAIMMSTXRG------RRVPPHDSL 86
RG+YRGL + RQ N+ + + R+PP + L
Sbjct: 160 RGLYRGLAATVARQAANSGVRFTAYNSIKQSLQSRLPPDEKL 201
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 28.3 bits (60), Expect = 1.3
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Frame = -1
Query: 524 KRIYAKSGIRGFYKGITASYMGISETVVHFVLYEGVKARLIAARSVDGVASDQRSPRDFI 345
++ Y G+RG Y+G S +GI VV+ LY G+ L V + +F+
Sbjct: 183 RKTYRSDGLRGLYRGFGPSVVGI---VVYRGLYFGMYDTLKPVVLVGPLEG------NFL 233
Query: 344 EFMGAGAFSKTVASCIAYPHEVARTRL---REEGDKYRKFWQTLHTVWMEEGXPWSLQGS 174
G T + +YP + R R+ E KY ++ + +EG +G+
Sbjct: 234 ASFLLGWAVTTGSGVASYPLDTIRRRMMMTSGEAVKYSSSFECGRQILAKEGARSFFKGA 293
Query: 173 G 171
G
Sbjct: 294 G 294
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 332 AGAFSKTVASCIAYPHEVARTRLREEGDKY 243
AGA ++T+++ I P E+ RTR++ G Y
Sbjct: 142 AGASARTISATIVSPIELFRTRVQAVGGHY 171
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 536 LQCIKRIYAKSGIRGFYKG-ITASYMGISETVVHFVLYEGVKARL 405
+Q I IY +GI+G Y+G + +G +T V L + V+ L
Sbjct: 247 MQTIMSIYKNNGIKGLYRGAVPRMGLGAYQTFVMVFLADCVRGYL 291
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 190 GVYRGLGTQLVRQIPNTAIMMST 122
GVYRGLG+ LV P ++ +T
Sbjct: 124 GVYRGLGSILVGSAPGASLFFTT 146
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 374 SDQRSPRDFIEFMGAGAFSKTVASCIAYPHEVARTRLREEG 252
S + S F E +GAG + +P + +TRL+ +G
Sbjct: 74 SKRHSAMSFFEALGAGICAGLAVDLSLFPIDTLKTRLQAKG 114
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 572 TRLQLDGQHVTALQCIKRIYAKSGIRGFYKGITASYMGIS 453
TR+ Q ++ + IK I A G YKGI + +S
Sbjct: 284 TRIMTSQQRLSYVFTIKSIVAHEGFLALYKGIVPRVLWLS 323
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/62 (20%), Positives = 24/62 (38%)
Frame = -1
Query: 347 IEFMGAGAFSKTVASCIAYPHEVARTRLREEGDKYRKFWQTLHTVWMEEGXPWSLQGSGN 168
I+ + G F++ P V + R Y + ++ +W +EG +G G
Sbjct: 107 IQNLWMGGFARAAVGFAFMPVTVIKVRYESNLYSYTTIYSSIRDIWKKEGISGFFRGFGV 166
Query: 167 AA 162
A
Sbjct: 167 TA 168
Score = 25.8 bits (54), Expect = 7.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -1
Query: 572 TRLQLDGQ-HVTALQCIKRIYAKSGIRGFYKGITASYM--GISETVVHFVLYE 423
TR+QL+ + L K +YA G RGF G + IS T+ + +YE
Sbjct: 236 TRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSISSTIT-WSVYE 287
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 223 RVCQNFRYLSPSSLNRVLATSCG*AMH-EATVFEKAPAPMNSMKSRGDLWSLATPSTL 393
++CQ+F + PS RV++ + G A+ + + K P + + + G LWS+ + L
Sbjct: 207 QICQHFELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVV--VATPGRLWSVINENNL 262
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 542 TALQCIKRIYAKSGIRGFYKGITASYMGIS-ETVVHFVLYEGVK 414
T C + G++G Y+G+T + + V F +Y+ +K
Sbjct: 52 TIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPCC1739.10 |mug33||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 336
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 117 RYVDIMMAVFGICLTSCVPRPL 182
+Y D+ VFG CL S +PL
Sbjct: 37 KYGDVRFGVFGYCLNSNCSKPL 58
>SPBC23G7.10c |||NADH-dependent flavin oxidoreductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/48 (22%), Positives = 21/48 (43%)
Frame = -1
Query: 323 FSKTVASCIAYPHEVARTRLREEGDKYRKFWQTLHTVWMEEGXPWSLQ 180
+ T I +P EV + + D F++ T W+ +G W ++
Sbjct: 230 YGGTFEKRILFPMEVVHSVRKAIPDSMPLFYRVTATDWLPKGQGWEIE 277
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 973
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 255 FFSQSRSCYLVWISNARSDGL 317
FFS + C W+ A DGL
Sbjct: 940 FFSNQQKCLRCWMHTAHEDGL 960
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,975,912
Number of Sequences: 5004
Number of extensions: 60040
Number of successful extensions: 182
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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