Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_G12
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380...    93   2e-19
05_01_0243 - 1806770-1806832,1806942-1807061,1807275-1807457,180...    28   9.5  

>10_08_0254 +
           16236689-16236793,16237760-16237808,16237988-16238076,
           16238178-16238234,16238684-16238746,16238828-16238893,
           16239520-16239606,16239691-16239784,16240351-16240673,
           16241022-16241048,16241065-16241145,16241445-16241476,
           16242126-16242266,16242455-16242516,16243170-16243387
          Length = 497

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 40/56 (71%), Positives = 46/56 (82%)
 Frame = -2

Query: 695 MNNQYXCNRPISVSYAFKKDVKGERHGSAAERLLAAQNPLSHADRPHQLFADAPPT 528
           MNNQ+ CNRPI+VSYA+KKD KGERHG+ AERLLAA NP S  +RPH +FA  PPT
Sbjct: 174 MNNQHLCNRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPT 229


>05_01_0243 -
           1806770-1806832,1806942-1807061,1807275-1807457,
           1807554-1807693,1807768-1808010,1808664-1808781,
           1808902-1808977,1809054-1809120,1809201-1809288,
           1809381-1809491,1809632-1809799,1809946-1810040,
           1810123-1810162,1810242-1810318,1810607-1810655,
           1810756-1810812,1810959-1811048,1811160-1811223,
           1812085-1812245
          Length = 669

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 599 ISLLLSRASPLSHPS*MHMKLISACYIXTGYSLLQLLHP 715
           + LL+S  +PLS+     +++ S  Y   GY L + L P
Sbjct: 390 LRLLISGGAPLSNEIEEFLRVTSCAYFIQGYGLTETLGP 428


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,849,430
Number of Sequences: 37544
Number of extensions: 142857
Number of successful extensions: 346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)