Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_G11
(791 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 33 0.20
11_07_0002 - 27171791-27172222 32 0.60
09_02_0279 + 6702517-6702948 32 0.60
01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305 31 0.79
07_01_0901 + 7578143-7578327,7578430-7578455,7578576-7578606,757... 30 1.8
01_01_0085 - 639959-640192,640290-640379,640465-640521,640826-64... 30 1.8
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 30 2.4
05_07_0294 - 29038259-29038420,29038526-29038632,29038889-290390... 30 2.4
05_01_0442 - 3500849-3500866,3500950-3501027,3501260-3501352,350... 29 4.2
04_03_0830 - 20125827-20125913,20126262-20126357,20126974-201270... 29 4.2
11_06_0583 + 25213680-25213827,25213920-25214335 29 5.6
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 29 5.6
05_04_0320 + 20181560-20182063,20182513-20182853,20183159-201838... 29 5.6
09_06_0081 + 20745627-20748144,20748211-20748308 28 7.4
02_05_0534 + 29819323-29819900,29820122-29820202,29821007-298210... 28 7.4
10_08_0875 + 21212413-21212758,21215931-21217357 28 9.8
10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643 28 9.8
09_04_0025 - 13882424-13882657 28 9.8
09_03_0158 - 12878690-12879687,12880115-12880178,12880580-12880645 28 9.8
08_02_0575 - 18876988-18877029,18877072-18877102,18878290-188784... 28 9.8
06_03_1037 - 27058002-27058082,27058856-27059041,27060033-270601... 28 9.8
02_05_0665 - 30720842-30721003,30721290-30721448,30721555-307216... 28 9.8
02_05_0077 + 25645730-25645993,25647172-25647648,25648027-256482... 28 9.8
01_06_1814 + 40061080-40061395,40062243-40062641,40062758-40062864 28 9.8
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3
Query: 405 QAGSGPAGCSGTPAAPSGRPDGLPCRDG 322
++GSG AGC G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>11_07_0002 - 27171791-27172222
Length = 143
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 435 RSTVYRVPTRQAGSGPAGCSGTPAAPSGRPDG----LPCRDGRRF 313
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 435 RSTVYRVPTRQAGSGPAGCSGTPAAPSGRPDG----LPCRDGRRF 313
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305
Length = 196
Score = 31.5 bits (68), Expect = 0.79
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 308 PSIRLEGSVGRASLG*AAPSGCSVDRGSPPTSSGFWPRRGSDVGCKSAEESFG-GWALKS 132
P RL S +G G + P SSG W RRG +V C++A+ G S
Sbjct: 36 PRARLSASYAAFPIG-----GIGAWAAATPASSGRWRRRGLEVVCEAAKTGTATGRRPDS 90
Query: 131 LGPRSAHNTMQIVESHIPRA 72
+ R N + +H +A
Sbjct: 91 VKKRERQNDRHRIRNHARKA 110
>07_01_0901 +
7578143-7578327,7578430-7578455,7578576-7578606,
7578690-7578777,7578889-7579034,7579641-7579685,
7579776-7579879,7579976-7580112,7580553-7580654,
7581375-7581587
Length = 358
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 209 GFWPRRGSDVGCKSAEESFGGWALKSLGPRS 117
G WPRR +D+G ++ S G GPRS
Sbjct: 10 GPWPRRAADLGVAQSQRSPAGGKKSRRGPRS 40
>01_01_0085 -
639959-640192,640290-640379,640465-640521,640826-640858,
640972-641046,641141-641230,641343-641444,641643-641713,
642243-642396,642497-642573,643077-643113
Length = 339
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 242 SVDRGSPPTSSGFWPRRGSDVGCKSAEESFGGWALKSLG 126
S+ GSP +S+G G+ G ++ FGG L LG
Sbjct: 294 SIREGSPESSNGASSSTGASTGTNTSTSRFGGLRLPGLG 332
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 59 RANGARGVCETQRSAWCCEQTAGPRISEPTHQTTPLHS--YTRRPIPSEARTRMR*GGY 229
R +G+RG QR + PR S P +P S Y+R P P AR RMR Y
Sbjct: 132 RISGSRGRSYDQR------YSRSPRYSPPPRGRSPYRSPSYSRSPSPRYARRRMRERSY 184
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 182 RPIPSEARTRMR*GGYRGQHYNQTARLTPR 271
R PSE R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>05_07_0294 -
29038259-29038420,29038526-29038632,29038889-29039093,
29039173-29039536,29039588-29039772,29039879-29040080,
29040697-29041589
Length = 705
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -3
Query: 402 AGSGPAGCSGTPAAPSGRPDGLP----CRDGRRFRAFDSPRRLRRQGVLG 265
+G G GC G A S + LP C GR A +P R R VLG
Sbjct: 122 SGGGGGGCGGGSTASSPLTNALPTGNICPSGRVASAAPAPPRRARPDVLG 171
>05_01_0442 -
3500849-3500866,3500950-3501027,3501260-3501352,
3501419-3501536,3502815-3502945,3503027-3503299,
3504825-3504882,3505065-3505388,3507404-3507852,
3509514-3509554,3510263-3510412,3510519-3510906
Length = 706
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 405 QAGSGPAGCSGTPAAPSGRPDGLPCRDG 322
++GSG GC G+ A GR G RDG
Sbjct: 213 RSGSGKGGCVGSRADQDGRIGGREVRDG 240
>04_03_0830 -
20125827-20125913,20126262-20126357,20126974-20127053,
20127124-20127220,20127457-20127544,20128491-20128576,
20129358-20130530
Length = 568
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 7/71 (9%)
Frame = -1
Query: 224 PPTSSGFW--PRRGSDVGCKSAE----ESFGGWALKSLGP-RSAHNTMQIVESHIPRAPH 66
PPTSS +W G+ SA S WA P R+ T I APH
Sbjct: 317 PPTSSSYWLSAADGATAAAPSARTHGARSHRSWAWALASPMRALRPTSSSSSKSIMAAPH 376
Query: 65 LRGDLVGGSAL 33
RG + G +
Sbjct: 377 NRGGVSGNGGM 387
>11_06_0583 + 25213680-25213827,25213920-25214335
Length = 187
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 444 WSDRSTVYRVPTRQAGSGPAGCSGTPAAPSG 352
W +ST+ +P R+A + AG G P A G
Sbjct: 14 WWPKSTICGIPRRKAAATAAGDGGRPMAADG 44
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 140 EPTHQTTPLHSYTRRPIPSEARTRMR*GGYRGQHYN 247
+P HQ P H Y ++ P GG+RGQ+YN
Sbjct: 823 QPPHQQPPNHDYGQQAYP---------GGWRGQYYN 849
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = -3
Query: 420 RVPTRQAGSGPAG---CSGTPAAPSGRPDGLPCRDGRRFRAFDS-PRRLRRQGVLGVSRA 253
RVPTR G G G G+ GR G D R FD RR R + G++RA
Sbjct: 881 RVPTRPRGGGGGGVPRSEGSIQGRGGRAGGSGAEDAR--HVFDELLRRGRGASIYGLNRA 938
Query: 252 V 250
+
Sbjct: 939 L 939
>05_04_0320 +
20181560-20182063,20182513-20182853,20183159-20183819,
20183954-20184112
Length = 554
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 206 FWPRRGSD-VGCKSAEESFGGWALKSLGPRSAHNTMQIVESHIPR 75
F PRR D VG K + SFGG +G A+ ++ + SH+ R
Sbjct: 431 FGPRREEDKVGGKFSYTSFGGGRNSCVGENYAYMQIKAIWSHLLR 475
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 411 TRQAGSGPAGCSGTPAAPSGRPDGLP 334
T +A + PA + PAAP P GLP
Sbjct: 715 TPRAPTPPAAAAAAPAAPPALPSGLP 740
>02_05_0534 +
29819323-29819900,29820122-29820202,29821007-29821027,
29821310-29821366,29822028-29822147,29822278-29822494
Length = 357
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -2
Query: 625 LFPFPHR--SVAVEPGAGGGSAPVRP 554
LF PHR S +P GGG APV P
Sbjct: 28 LFLHPHRHFSAPSQPDGGGGPAPVSP 53
>10_08_0875 + 21212413-21212758,21215931-21217357
Length = 590
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -3
Query: 468 SSALPWSEWSDRSTVYRVPTRQAGSGPAGCSGTPAAPSGRPD 343
SS+ P W+ S VY+ G S T APS PD
Sbjct: 170 SSSHPGEFWNGSSNVYKKECGSGVGSSKGSSITVVAPSSAPD 211
>10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643
Length = 532
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 522 TGGEAATYRGPGRTGALPPPAPGSTATDRCGKGXSSP 632
T A++ P + ALPPP P D G ++P
Sbjct: 204 TAAAASSTDEPSTSSALPPPTPPRPLPDMAGPSSATP 240
>09_04_0025 - 13882424-13882657
Length = 77
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 417 VPTRQAGSGPAGCSGTPAAPSGRPDGLP 334
V +A SGP+GCS P SGRP P
Sbjct: 48 VSVSKASSGPSGCSNDPHI-SGRPCAPP 74
>09_03_0158 - 12878690-12879687,12880115-12880178,12880580-12880645
Length = 375
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 PPNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKD-ALP 282
PP+ +L+ P+SDP + + P R + D H KD ALP
Sbjct: 141 PPSSQKSLMEPSSDPTQKKLPFLPISQKRCSGTDDAMPHRKDPALP 186
>08_02_0575 -
18876988-18877029,18877072-18877102,18878290-18878418,
18878512-18879154,18882042-18883990,18884964-18885040
Length = 956
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = +3
Query: 9 FFFSFLRVEGRTSYEVPAQMGRAGYVRLNDLHGVVSRPRAQGFQSPP 149
F ++L++EG ++P+++ Y+R + +V+ R++ PP
Sbjct: 358 FLLTYLQIEGNVCIDLPSELQGLKYLRTLHIGAMVTFLRSEVVHLPP 404
>06_03_1037 -
27058002-27058082,27058856-27059041,27060033-27060176,
27060284-27061183
Length = 436
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 525 GGEAATYRGPGRT-GALPPPAPGSTATDRCGKGXSSPXS 638
GG A RG G A PP APGS D G + P S
Sbjct: 32 GGGAGRGRGRGLPPSATPPRAPGSPVPDDDDGGGADPFS 70
>02_05_0665 -
30720842-30721003,30721290-30721448,30721555-30721687,
30722042-30722227,30722377-30722906
Length = 389
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 441 SDRSTVYRVPTRQAGSGPAGCSGTPAAPSGRPDGLPCRDGR 319
S + R +AGSG S +P P+ RP L GR
Sbjct: 10 SPEQPLLRPSAARAGSGSGNLSSSPPPPAARPSRLAALIGR 50
>02_05_0077 +
25645730-25645993,25647172-25647648,25648027-25648237,
25648407-25648564,25648641-25648711,25648829-25648934,
25649008-25649094,25649701-25650252,25650337-25650403,
25650971-25651104,25651175-25651228,25651376-25651472,
25652007-25652212,25652287-25652367,25652543-25652608,
25653025-25653098,25653766-25653871
Length = 936
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 148 PPNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPD 252
PP SDPL+G E G +P S L PD
Sbjct: 508 PPFTQPVAQLSLSDPLQGSPAREEGEVPESELDPD 542
>01_06_1814 + 40061080-40061395,40062243-40062641,40062758-40062864
Length = 273
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = -3
Query: 468 SSALPWSEWSDRSTVYRVPTRQAGSGPAGCSGTPAAPSGRPDGLPC 331
SSA+ W D +PT A + P G PA P P C
Sbjct: 62 SSAVTWRALLDFFAARGLPTGDAPAAPVAVHGKPAPPPPPPPVSDC 107
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,172,452
Number of Sequences: 37544
Number of extensions: 462555
Number of successful extensions: 2229
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2225
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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