Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_G10
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0135 + 18322962-18323136,18323182-18323237,18323749-183238...    31   1.0  
11_06_0296 + 22046649-22048202,22048524-22048703,22048811-220488...    30   2.4  
03_02_0341 - 7643426-7643973,7644340-7644505                           29   4.1  
08_02_0049 + 11632868-11632948,11633230-11633322,11634937-116350...    29   5.4  
03_02_0412 - 8219712-8219837,8221451-8221543,8221826-8221906           29   5.4  

>05_04_0135 +
           18322962-18323136,18323182-18323237,18323749-18323885,
           18324679-18324865,18324958-18325080,18325828-18326112
          Length = 320

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 392 HEHEGAQQGSAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEV 550
           HE   A  GS   T L  +DD TL  +++ S +  + +  +A  LQ+  H E+
Sbjct: 257 HESSAAIAGSVEVTKLLASDDGTLARDSVISVVDGKVKQDIALRLQNVEHGEL 309


>11_06_0296 +
           22046649-22048202,22048524-22048703,22048811-22048860,
           22049443-22049564,22051007-22051119,22051227-22051436,
           22052152-22052265,22052529-22052658,22053010-22053143,
           22053997-22054077,22054181-22054267
          Length = 924

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
 Frame = +2

Query: 353 WGQRRIRSQNLESHEHEGAQQGSAVGTTLQNADDATLTAETLFSEIQEQHEAVL----AA 520
           W  +   +++ E H+       +A      N  D  ++   + SE++   EA +    A 
Sbjct: 75  WSGKEGSAEDEEEHKRAALSAFAAAAWLAPNCVDIAVSHAEMLSEVERYEEAYVELLRAL 134

Query: 521 GLQDPGHAEVHHVV 562
           G+ DP     H VV
Sbjct: 135 GISDPADPAAHDVV 148


>03_02_0341 - 7643426-7643973,7644340-7644505
          Length = 237

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = +2

Query: 410 QQGSAVGTTLQNADDATLTAETLFSEIQEQHEAVLAAGLQDPGHAEVHHVVVH 568
           Q+ S +    Q   D   T   L  ++        +A L DP H   HH+V+H
Sbjct: 118 QEPSMIVAAQQPGHDGAKTFVALAGKVHRPSAECASAFLCDPFHKHHHHIVLH 170


>08_02_0049 +
           11632868-11632948,11633230-11633322,11634937-11635030,
           11635063-11635292
          Length = 165

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/54 (25%), Positives = 31/54 (57%)
 Frame = -3

Query: 613 RFISPENTVIRWEAVVHNNMMYLRVPGVLQSGSKDSFMLLLDFAEERLGCKSCI 452
           R  +P+  ++R  AV+H++ M   +  +L +G+K+    L ++  E+L   +C+
Sbjct: 22  RLWAPKAYLMRAGAVIHSHGMETCIATMLNTGAKEFRGTLTEYLSEKLIYANCV 75


>03_02_0412 - 8219712-8219837,8221451-8221543,8221826-8221906
          Length = 99

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/54 (25%), Positives = 31/54 (57%)
 Frame = -3

Query: 613 RFISPENTVIRWEAVVHNNMMYLRVPGVLQSGSKDSFMLLLDFAEERLGCKSCI 452
           R  +P+  ++R  AV+H++ M   +  +L +G+K+    L ++  E+L   +C+
Sbjct: 22  RLWAPKAYLMRAGAVIHSHGMETCIATMLNTGAKEFRGTLTEYLSEKLIYANCV 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,922,598
Number of Sequences: 37544
Number of extensions: 342854
Number of successful extensions: 846
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)