Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_G07
         (830 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1363 - 32898345-32898371,32898986-32899837,32900234-329005...    30   2.0  
01_01_0680 + 5217633-5219072                                           29   3.4  
08_01_0569 - 5066760-5067179                                           29   4.5  

>04_04_1363 -
           32898345-32898371,32898986-32899837,32900234-32900500,
           32900723-32901025,32902329-32902433,32903361-32903548,
           32903628-32903721
          Length = 611

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 513 HGAGRQRVC--RGASPERHLEHCHAELPPSPRVLGSCTRTGTESGH 644
           H +G++     R A  E H +HCHA+   S  V G+ T    E G+
Sbjct: 383 HASGQEAAADQRDAHEEHH-DHCHAQSQGSSNVAGTMTGKNQEQGN 427


>01_01_0680 + 5217633-5219072
          Length = 479

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 371 PRVSRVQAAAARHPRRSGASSPTSLILVTSL 279
           PR +   A AA  PRRS ASS   L+L  +L
Sbjct: 25  PRTTTTTAGAAPAPRRSSASSRLHLLLTAAL 55


>08_01_0569 - 5066760-5067179
          Length = 139

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 395 RLGEAGSAPRVSRVQAAAARHPRRSGASSPTSLILVTSL 279
           RLG A +A  V+ ++ A  R  RR+G+S     +L+ +L
Sbjct: 29  RLGMASAAVAVAALEGAQGRRRRRAGSSGAGGAVLLPAL 67


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,272,001
Number of Sequences: 37544
Number of extensions: 213320
Number of successful extensions: 1015
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)