Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_G04
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 34 0.10
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.18
U41012-7|AAM75375.1| 639|Caenorhabditis elegans Hypothetical pr... 32 0.54
U41012-6|AAM75376.1| 642|Caenorhabditis elegans Hypothetical pr... 32 0.54
U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclas... 29 3.8
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 28 6.6
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 28 6.6
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr... 28 8.8
U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified vi... 28 8.8
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 28 8.8
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 34.3 bits (75), Expect = 0.10
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Frame = -3
Query: 730 YPCNXSESIGILGVHISSDVQSRSHLEGKAKLASKMLGVLNRAKRYFTPGQRL--LLYKA 557
YP LG IS + H + LA L N +Y T ++L LLYK
Sbjct: 139 YPIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLA--NIFNQYSTSNKKLMILLYKT 196
Query: 556 QVRPRMEYCSHLWAGAPKYQLLPFDSIQRRAVRIVDNPILSDRLEP 419
+RPR+EY + + + K +S+Q R + + I + P
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTRRLYSRIKKRYINP 242
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = -3
Query: 730 YPCNXSESIGILGVHISSDVQSRSHLEGKAKLASKMLGVLNRAKRYFTPGQRL--LLYKA 557
YP LG IS + H LA L N +Y T ++L LLYK
Sbjct: 169 YPIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLA--NMFNKYSTSNKKLMILLYKT 226
Query: 556 QVRPRMEYCSHLWAGAPKYQLLPFDSIQRRAVR 458
+RPR+EY + + + K +S+Q R
Sbjct: 227 FIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>U41012-7|AAM75375.1| 639|Caenorhabditis elegans Hypothetical
protein C06A6.2a protein.
Length = 639
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 368 EHTVQNTEGTEVPPQTQRLQTIRENGI--IDNPNGPPLYGVK 487
+H T + P ++ Q + +N I +DN NGPPL VK
Sbjct: 397 DHAASTTSVLQAPNYSELKQMLEKNNILKVDNENGPPLKRVK 438
>U41012-6|AAM75376.1| 642|Caenorhabditis elegans Hypothetical
protein C06A6.2b protein.
Length = 642
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 368 EHTVQNTEGTEVPPQTQRLQTIRENGI--IDNPNGPPLYGVK 487
+H T + P ++ Q + +N I +DN NGPPL VK
Sbjct: 397 DHAASTTSVLQAPNYSELKQMLEKNNILKVDNENGPPLKRVK 438
>U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclase
protein 12 protein.
Length = 1280
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = -1
Query: 681 RAMSSLGVIWKAKPSWRPKCWESSTEQSGTSRLDKDFC-FIKHKSGLAWSTAPISGPGLP 505
R L +IWK P + +S S + D F K K+ WS AP+ G G+
Sbjct: 625 RFEKELSMIWKIDPYEVRRVVGGVNNESTASLMQSDVMQFAKTKTPW-WSKAPVQGTGMR 683
Query: 504 NTSFFHLTPYRGGPFGLSIIPFSR 433
L Y+G GL + + R
Sbjct: 684 G-----LASYKGTLVGLKDLMYGR 702
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 45 GPPDGEWLPVAHGLQQCQGAE-PSRCLPL 128
GPP GE P+ HG+ Q P LPL
Sbjct: 352 GPPMGEMQPIVHGIPSAQSVNFPPPGLPL 380
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 45 GPPDGEWLPVAHGLQQCQGAE-PSRCLPL 128
GPP GE P+ HG+ Q P LPL
Sbjct: 352 GPPMGEMQPIVHGIPSAQSVNFPPPGLPL 380
>U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical
protein C02F12.8 protein.
Length = 687
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 255 HPQYVSRDLFCHVPSGYGMSSPPRCFPSART 163
HPQ V++ + HVP G +PP+ P+ T
Sbjct: 162 HPQIVNQPMHPHVPVGSQNYNPPQFVPAPPT 192
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 28.3 bits (60), Expect = 6.6
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 16/172 (9%)
Frame = -3
Query: 727 PCNXSESIGILGVHISSDVQSRSHLEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVR 548
P N + +GIL S + + H++ LA L ++ + P L+K +
Sbjct: 191 PSNIARDLGIL---TDSKLTFKPHIKKIVSLALLRCKQLLKSFKSLCPEFYCNLFKTYIL 247
Query: 547 PRMEYCSHLWAGAPKYQL-----LPFDSIQRRAVR--IVDNPILSDRLEPLGL-----RR 404
P +EY S +++ P L P ++ ++ V + +DRL+ L L RR
Sbjct: 248 PLIEYGSAVYSPKPSSSLSTLLEKPLRWYSQKVLQKFNVSYSLYNDRLKSLNLHSIRHRR 307
Query: 403 DFGSLCILYRMFHGECF----EELFEMIPASRFYHRTARHRSRVHPYYLEPL 260
L +LY+ G F E F++ +SR R H + ++ + +
Sbjct: 308 LKSKLILLYKFCCGTSFLRRKETFFKLSTSSRRPMRIICHNPSSNNFFSDTI 359
>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical protein
C09G1.2 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 397 RSPSADPEAPNDPREWDYRQSERPSSVWSQMEEAG--IWEPR 516
R+P P+ P++P E + ++ RP ++ E G + EPR
Sbjct: 1054 RAPPEQPQEPDEPEESEEQEPVRPEQQNIEIPEGGGVLTEPR 1095
>U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform b
protein.
Length = 284
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 333 YQHLVFTIAPPATGVEFIHTTWSHCGHPQYVSRDLFCHV 217
+ H+ T A P+T E W G P Y+ RD F H+
Sbjct: 239 HAHVNHTAASPST--EERRAAWE-AGQPDYLGRDAFVHI 274
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = -3
Query: 727 PCNXSESIGILGVHISSDVQSRSHLEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVR 548
P S ++ LG+ ++ H+ + LA + +A +P LYK V
Sbjct: 969 PITPSSTVRDLGLITDCKLKFEHHIVKVSCLAMLRSKQILKAFSSNSPKFYAHLYKTYVA 1028
Query: 547 PRMEYCSHLWA 515
P M YCS ++A
Sbjct: 1029 PIMNYCSEVYA 1039
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,998,860
Number of Sequences: 27780
Number of extensions: 553731
Number of successful extensions: 1705
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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