Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_G01
(770 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 38 0.001
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 32 0.10
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 32 0.10
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 31 0.14
SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharo... 31 0.18
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 30 0.42
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 0.56
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 29 0.97
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 29 0.97
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 29 0.97
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 29 0.97
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 28 1.3
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 28 1.7
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 27 2.2
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 27 3.0
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 27 3.0
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 27 3.0
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 27 3.9
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 27 3.9
SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor Vma6|S... 27 3.9
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.2
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 26 5.2
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 26 5.2
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 26 6.9
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 6.9
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 26 6.9
SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2 |Schizosacch... 25 9.1
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 25 9.1
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = -1
Query: 590 EIQNESNNGIDEENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVVEKE 411
E ++S++ +D N V T +N E V + NS SDE+S + + E E
Sbjct: 116 EDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELE 175
Query: 410 QARSEDNRDQILTPKRD 360
+ E R+Q+L +++
Sbjct: 176 NIKQERKREQMLQEEKN 192
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 31.9 bits (69), Expect = 0.10
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = -1
Query: 599 QDVEIQNESNNGIDEENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVV 420
+ + + N+ NG +E NE+ VI +N+ N AE N V++DE+ + R A ++
Sbjct: 372 EPIIVNNDDENGNNESENEE-VIEEDNLNRNVIAE---AQNQVVADEERNAVAR-AAQIA 426
Query: 419 EKEQARSED 393
E + A D
Sbjct: 427 EADDADDFD 435
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 31.9 bits (69), Expect = 0.10
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = -1
Query: 500 AERVPTPNSVLSDEKSS-LTPRPAREVVEKEQARSEDNRDQILTPKRDTTCSSNDETPTT 324
AE V N + SS +P A K Q + + N I P S+D P +
Sbjct: 227 AENVTYQNGHYKKKGSSPFSPPNAHSRRRKSQGKDQSNTPVIKAPAPIPFSVSSD--PPS 284
Query: 323 TAGSDTDVLKTPDAQQTGRVKTTDYGTPVLNIASPYRKLPS 201
T G +++P V +T++ TP +++S LPS
Sbjct: 285 TMGRSNSAVQSPSYFAHSLVNSTEFSTPNESLSSLPSILPS 325
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 31.5 bits (68), Expect = 0.14
Identities = 23/121 (19%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = -1
Query: 590 EIQNESNNGIDE-ENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVVEK 414
E+ E ++ +++ + N+K + +E+ +E PT +D K + R + ++
Sbjct: 112 EMFREEDSAVEQGQMNDKQQLLLES------SEPTPTIKQQFNDRKKNAQIREREALAKR 165
Query: 413 EQARSEDNRDQILTPKRDTTCSSNDETPTTTAGSDTDVLKTPDAQQTGRVKTTDYGTPVL 234
EQ ED R +I + +D T + L+ Q+ ++ +G +L
Sbjct: 166 EQEMIEDRRQRIKEVTENLEKRLDDWIAKATTEEGLNALREKYTQEANTLRIESFGVEIL 225
Query: 233 N 231
+
Sbjct: 226 H 226
>SPBC56F2.11 |met6||homoserine
O-acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 489
Score = 31.1 bits (67), Expect = 0.18
Identities = 31/106 (29%), Positives = 49/106 (46%)
Frame = -1
Query: 503 DAERVPTPNSVLSDEKSSLTPRPAREVVEKEQARSEDNRDQILTPKRDTTCSSNDETPTT 324
DA R P P+ + + LTP A VV +E NR+ +R+ C SN +PT+
Sbjct: 254 DASRHPYPDRL----PTPLTPSNAHWVVH-----NEGNRN-----RRERPCRSNGSSPTS 299
Query: 323 TAGSDTDVLKTPDAQQTGRVKTTDYGTPVLNIASPYRKLPSGTKFA 186
+ ++ G +TTD + LN +S R+ P+ T F+
Sbjct: 300 ESALNSPASSVSSLPSLGASQTTDSSS--LNQSSLLRR-PANTYFS 342
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 29.9 bits (64), Expect = 0.42
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 554 ENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVVEKEQARSEDNRDQ 381
E+NE V A N + N+ E ++S+EKSS + EV K+ A ED +Q
Sbjct: 492 EDNEDKVKADSNGPTQNENETADASKDMISEEKSSKDADNSLEVAGKDFA--EDGTEQ 547
Score = 27.9 bits (59), Expect = 1.7
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -1
Query: 458 KSSLTPRPAREVVEKEQARSEDNRDQILTPKRDTTCSSNDETPTTTAGSD--TDVLKTPD 285
+S TP P E + +Q ++EDN D++ K D+ + +E T A D ++ + D
Sbjct: 473 ESKPTPSPPAEQLT-DQKQNEDNEDKV---KADSNGPTQNENETADASKDMISEEKSSKD 528
Query: 284 AQQTGRVKTTDY 249
A + V D+
Sbjct: 529 ADNSLEVAGKDF 540
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 29.5 bits (63), Expect = 0.56
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = -1
Query: 581 NESNNGIDEENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVVEKEQAR 402
N+S++ + +E ++ +S++D+E + S SS + + +
Sbjct: 126 NDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSS 185
Query: 401 SEDNRDQILTPKRDTTCSSND-ETPTTTAGSDT 306
S D+ + + D++ SS+D E+ +++ GSD+
Sbjct: 186 SSDSESESSSEDSDSSSSSSDSESESSSEGSDS 218
Score = 26.6 bits (56), Expect = 3.9
Identities = 18/93 (19%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = -1
Query: 581 NESNNGIDEENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVVEKEQAR 402
N+S++ + +E ++ +S++D+E + S SS + + +
Sbjct: 180 NDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSS 239
Query: 401 SEDNRDQILTPKRDTTCSSND-ETPTTTAGSDT 306
S D+ + + D++ SS+D E+ +++ SD+
Sbjct: 240 SSDSESESSSEDSDSSSSSSDSESESSSKDSDS 272
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 28.7 bits (61), Expect = 0.97
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = -1
Query: 371 PKRDTTCSSNDETPTTTAGSDTDVLK----TPDAQQTGRVKTTDYGTPVLNIASPYRKLP 204
P R + S TP+TT S TDV + A + T +P + A+P P
Sbjct: 142 PHRSSQFQSTTLTPSTTDSSSTDVSSSDSVSTSASSSNASNTVSVTSPASSSATPLPNQP 201
Query: 203 SGTKF 189
S +F
Sbjct: 202 SQQQF 206
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 28.7 bits (61), Expect = 0.97
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 488 PTPNSVLSDEKSSLTPRPAREVVEKEQARSEDNRDQILTP--KRDTTCSSNDETPTTTAG 315
PTPNS+ S + RPA RS + D+IL K T SS D TP + +
Sbjct: 197 PTPNSIKSAHPAEPPKRPA-------FTRSATSPDKILPTRIKSKDTVSSGDSTPLSGSS 249
Query: 314 SDTDVL 297
S +L
Sbjct: 250 SSKGML 255
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 28.7 bits (61), Expect = 0.97
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Frame = -1
Query: 521 NVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVVEKEQARSEDNRDQ----ILTPKRDTT 354
+++SN+D E T L + +S R A +V + ED+ Q LTP + TT
Sbjct: 172 SISSNHDNESTLTEGIALKEIESPDKDRKADGIVNLSVTQEEDDNHQSFNSSLTPSQPTT 231
Query: 353 CSSNDETPTTTAGSDTD---VLKTPDAQQTGRVKTTD 252
+ + A SD+ L+T + R+K D
Sbjct: 232 YNRANFFSINDASSDSSSDAPLRTLSSPSRLRMKDND 268
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 28.7 bits (61), Expect = 0.97
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 509 NNDAERVPTPNSVLSDEKSSLTPRPAREVVEKEQARSE-DNRDQILTPKRD 360
+ND+ V TP + E+ ++ + EV+E + SE +N + T +RD
Sbjct: 845 SNDSSNVQTPTAESEIEEDGVSEPISAEVIEDQSRNSEAENEKGLSTEQRD 895
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -1
Query: 422 VEKEQARSEDNRDQILTPKRDTTCSSNDETPTTTAGSDTDVLKTPDAQQTGRVKT 258
+E SEDN +++ ++N TP TT GSD ++ ++ +V T
Sbjct: 726 MEGTSVTSEDNIQDVVSEVSYNEDTNNQSTPDTT-GSDIHIVSEKRGKKGSKVIT 779
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 28.3 bits (60), Expect = 1.3
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Frame = -1
Query: 599 QDVEIQNES--NNGIDEENNEKVVIAVENVTSN--NDAERVPTPNSVLSDEKSSLTPRPA 432
++VE NE+ N+ DE+ +EK+ VE ++ + P P S+ +KS
Sbjct: 372 ENVESANENVNNHNADEQMDEKIKSLVEGNSAYEIEKGAQEPDPMSIDMTDKSETVSGFK 431
Query: 431 REVVEKEQARSEDNRDQILTPKRDTTCSSNDETPTTTAGSDTDVLKTPDAQQTGRVKTTD 252
+V + A +E N + +L K S +++TPT D +Q T +K D
Sbjct: 432 HDVDVYDTAENEGN-NTLLQIKE----SVHEKTPTQDEPMDI-------SQDT--IKQED 477
Query: 251 YGTPVLNIASPYRKLPSGTKFAKDICDVL 165
Y P L S ++ T+ +D L
Sbjct: 478 YYEPKLEQHSSSKRNSISTRKEEDAASAL 506
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 470 LSDEKSSLTPRPAREVVEKEQARSE-DNRDQILTPKRDTTCSSNDETP 330
L DE SL P P+ E VEKE A E ++ +L + +ETP
Sbjct: 38 LRDEFLSLHPAPSAESVEKEGAELEFEHELHLLAGFLGLIAAKEEETP 85
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = -1
Query: 578 ESNNGIDEENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVVEKEQARS 399
E +GI +N+ + E ++ +AER ++ DE+ + R+ K+ A S
Sbjct: 38 EEKDGIPLDNDNDENDSSEESATDEEAERQVREGFIVEDEEDEVPQEIRRKKKRKKHAES 97
Query: 398 EDNRDQI 378
++D +
Sbjct: 98 TADQDML 104
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -1
Query: 593 VEIQNESNNGIDEENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLT 444
+E NES + +E+NE I + SN ++ P+P + LT
Sbjct: 210 IESDNESKSPSQKESNESEDIQIAETPSNVTPKKKPSPEVPKLPDNRELT 259
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = -1
Query: 599 QDVEIQNESNNGIDEENNEKVVIAVENVTSNNDAERVPTPNSV 471
QD E + +N G+ ++ + + + S+ ++E + TPNS+
Sbjct: 655 QDYEDETFANEGLSASKFKEEFLLISDSKSDLNSEEIATPNSL 697
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 590 EIQNESNNGIDEENNEKVVIAVENVTSNNDAERVPTPN 477
E +N S+ DE+N++ +ENV S D E + TP+
Sbjct: 7 EYENPSSYKNDEDNDDDGDFVLENVMSEEDIE-IETPS 43
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 26.6 bits (56), Expect = 3.9
Identities = 31/130 (23%), Positives = 48/130 (36%)
Frame = -1
Query: 542 KVVIAVENVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVVEKEQARSEDNRDQILTPKR 363
KV N NN P+ N ++ + AR + + SE D +L +
Sbjct: 157 KVPKESNNTQQNNQFVMEPSQNKGNVNDANFFEVEYARNENMNKLSSSELISDDLLEDEI 216
Query: 362 DTTCSSNDETPTTTAGSDTDVLKTPDAQQTGRVKTTDYGTPVLNIASPYRKLPSGTKFAK 183
SS + P + +V K+P V + + LNI SP + S K K
Sbjct: 217 MKPLSSGESLPK----KEEEVTKSPSFTLDDSVASNEQTLAQLNIESPVDQKKSKAKKKK 272
Query: 182 DICDVLYFEN 153
+ L FE+
Sbjct: 273 EQKWTLKFES 282
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = -1
Query: 563 IDEENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVV--EKEQARSEDN 390
I+EEN+E + + E+ N + + T N +D T E+ EK + E
Sbjct: 208 IEEENDEILEDSKESKDENEENKETSTTNVAETDAPEEETVDTVEEIADEEKHSVKEESG 267
Query: 389 RDQILTPKRDTTCSSNDETPTT 324
+ ++ T S + T +T
Sbjct: 268 EASPQSSQQSTITSISTTTRST 289
>SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor
Vma6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -1
Query: 197 TKFAKDICDVLYFENLPNSTGNYKKMTTLLKKVKDEVDRI 78
TK + D L + N+T Y+ + + L+K+ E+D +
Sbjct: 554 TKLCDEPTDTLSLKGKSNTTSKYEPILSYLEKLSPELDHL 593
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 26.2 bits (55), Expect = 5.2
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = -1
Query: 587 IQNESNNGIDEENNEKVVIAVENVTSNNDAER--VPTPNSVLSDEKSSLTPRPAREVVEK 414
+Q+ + I + N EKV V+ TS N E+ P SV+ +SSL + E E
Sbjct: 623 LQDNAEKHISKSNLEKV--DVKGDTSPNSVEQGIEPQAASVVGSPRSSLVSNNSLE--EG 678
Query: 413 EQARSEDNRDQI---LTPKRDTTCSS-NDETPTTTAGSDTD 303
++ ++ + I L+ + D + N E P T GS D
Sbjct: 679 ALLKNSESLESIYGYLSEEPDPALTKLNTEDPFWTKGSSDD 719
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 26.2 bits (55), Expect = 5.2
Identities = 30/121 (24%), Positives = 41/121 (33%), Gaps = 8/121 (6%)
Frame = -1
Query: 587 IQNESNNGIDEENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLTPRPAREVVEKEQ 408
I SN+ D E +E + N+ N TP S + P E K
Sbjct: 47 ILESSNDNGDPEYSEN---GMGNMNMNTLPMATSTPMSYTKQPSEAKYPNSVWE--RKGV 101
Query: 407 ARSEDNRDQILTPKRDTTCSSNDE--------TPTTTAGSDTDVLKTPDAQQTGRVKTTD 252
+ E+N + K T SS +E PT T+ + P T KTT
Sbjct: 102 SDQEENTSSVKRQKTLPTQSSGEEEAKYSHPGAPTATSADSISMESRPSNLSTSLSKTTS 161
Query: 251 Y 249
Y
Sbjct: 162 Y 162
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -1
Query: 584 QNESNNGIDEENNEKVVIAVENVTSNNDAERVPTPNSVLSDEKSSLT 444
+ + N +E+N + + A E+ +N P + V S+EKS +T
Sbjct: 296 REDKQNDENEKNENEPIEASESAPTNVSDSTEPKASEVDSEEKSGVT 342
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 25.8 bits (54), Expect = 6.9
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -1
Query: 467 SDEKSSLTPRPAREVVEKEQARS----EDNRDQILTPKRDTTCSSNDETPTTTAGSDTDV 300
SDE S R + + K + S EDN LTPK +++ S + P T S T +
Sbjct: 1044 SDELQSRILRRKKMMASKNSSDSDSDSEDNFLASLTPKTNSSSISIENLPRKTKLS-TSL 1102
Query: 299 LKTPDAQQ 276
LK P ++
Sbjct: 1103 LKKPSKRR 1110
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.8 bits (54), Expect = 6.9
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = -1
Query: 551 NNEKVVIAVENVTSNNDA-ERVP--TPNSVLSDEKSSLTPRPAREVVEKEQARSEDNRDQ 381
+ E+ I + V N A E VP TP+ ++ E + + V ++ +ARS N +
Sbjct: 1326 SEEQAKIDKQKVALNPSAPEFVPDSTPSDAVASETDNKNLVENKAVEKRVEARSSANERK 1385
Query: 380 ILTPKRDTTCSSNDETPTTTAGSDTDVLKT 291
+R TT N T ++ D+ ++
Sbjct: 1386 QEERRRKTTPEGNRRALRTRTPTNEDIQRS 1415
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = -1
Query: 488 PTPNSVLSDEKSSLTPRPAR--EVVEKEQARSEDNRDQILTPKRDTTCSSNDETPTTTAG 315
P P ++ + KS+ PRP + + K+ A I PK S++ A
Sbjct: 1245 PNPPPIIGESKSTRKPRPTKRQRQIMKQVAEGLLPASAIAPPKSSNEKKSSNNVKAVEAE 1304
Query: 314 SDTDVLKTPDAQQT 273
+ + K+P T
Sbjct: 1305 TKSKSEKSPKKNGT 1318
>SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 213
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 359 TTCSSNDETPTTTAGSDTDV 300
T CS NDE PT +TDV
Sbjct: 68 TQCSDNDEFPTPKQIMETDV 87
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 CLLCVWCFQ-YIGVTTGCSSRRFVITATSCVAFGSEDLI 386
C VW Q +G+ G ++ + +C+ FGS ++I
Sbjct: 318 CFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEVI 356
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,614,010
Number of Sequences: 5004
Number of extensions: 53227
Number of successful extensions: 249
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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