Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_F22
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0072 + 13218669-13218706,13218715-13218781,13220400-132204...    30   2.2  
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    29   3.9  
12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156           28   9.0  
08_02_1004 - 23461798-23462024,23462340-23462415,23463479-234636...    28   9.0  

>12_02_0072 +
           13218669-13218706,13218715-13218781,13220400-13220471,
           13222107-13222182,13222309-13222943
          Length = 295

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -3

Query: 611 EGPQGGEAXSXXGRGXRXXSXXXTXAXXGGGGXGXGXXQRPXA 483
           EG  GG+     G G +           GGGG G G  ++P A
Sbjct: 191 EGDGGGDKKDGNGDGKKEGDAKAAKKEEGGGGGGDGGGKKPAA 233


>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/49 (30%), Positives = 17/49 (34%)
 Frame = +1

Query: 454 PIGAXXTXXHAXGLCXXPXPXPPPPXXAXVXXXXXLLXPLPXXEXASPP 600
           P  +      A  L   P P PPPP  A +     L  P P      PP
Sbjct: 213 PASSEPVDPSAASLPPLPPPPPPPPKPANIAGAPGLPLPPPPPPPPGPP 261


>12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156
          Length = 598

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +1

Query: 505 PXPXPPPPXXAXVXXXXXLLXPLPXXEXASPPC 603
           P P PPPP  + +     +L   P      PPC
Sbjct: 262 PRPQPPPPGSSDLPTDVAILPSPPHPRPPPPPC 294


>08_02_1004 -
           23461798-23462024,23462340-23462415,23463479-23463610,
           23463927-23464004,23464919-23465320
          Length = 304

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +1

Query: 505 PXPXPPPPXXAXVXXXXXLLXPLPXXEXASPPCGPS 612
           P   PPPP  A       LL P P    +  P GP+
Sbjct: 2   PTCLPPPPRAAIAAVLTSLLPPPPGASASLAPAGPA 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,236,689
Number of Sequences: 37544
Number of extensions: 191913
Number of successful extensions: 718
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)