Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_F15
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   134   8e-32
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   134   8e-32
06_03_0915 - 25929433-25930893                                         29   5.7  
12_01_0582 - 4752576-4752786,4752955-4753037,4753324-4753530,475...    28   7.6  
03_05_0901 + 28635672-28636094,28637623-28637802,28637903-286381...    28   10.0 

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  134 bits (324), Expect = 8e-32
 Identities = 59/87 (67%), Positives = 68/87 (78%)
 Frame = -2

Query: 691 EKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 512
           EK IPVD+VF +DEMID I            +RW   +LPRKTH+GLRKVACIGAWHP+R
Sbjct: 203 EKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 262

Query: 511 VSFTVARAGQKGYHHRTEMNKKIYRIG 431
           VS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 263 VSYTVARAGQNGYHHRTEMNKKVYKIG 289



 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = -1

Query: 293 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 138
           KGCC+GPKKR++TLR+SL   T R ALE+I LKFIDTSSKFGHGRFQT  +K
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 22/37 (59%), Positives = 27/37 (72%)
 Frame = -3

Query: 387 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 277
           A TE+D +EK ITPMGGFPHYG V  D++M +G   G
Sbjct: 298 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  134 bits (324), Expect = 8e-32
 Identities = 59/87 (67%), Positives = 68/87 (78%)
 Frame = -2

Query: 691 EKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 512
           EK IPVD+VF +DEMID I            +RW   +LPRKTH+GLRKVACIGAWHP+R
Sbjct: 203 EKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 262

Query: 511 VSFTVARAGQKGYHHRTEMNKKIYRIG 431
           VS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 263 VSYTVARAGQNGYHHRTEMNKKVYKIG 289



 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 42/60 (70%), Positives = 48/60 (80%)
 Frame = -1

Query: 293 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 114
           KGCC+GPKKR++TLR+SL   T R ALE+I LKFIDTSSKFGHGRFQT  +K  F G LK
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 22/37 (59%), Positives = 27/37 (72%)
 Frame = -3

Query: 387 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 277
           A TE+D +EK ITPMGGFPHYG V  D++M +G   G
Sbjct: 298 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334


>06_03_0915 - 25929433-25930893
          Length = 486

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +1

Query: 331 GETSHRCNGFLRQIILSRCIVFNNFAILFVDSLVQYDRFSCSFQY 465
           GE  H+  G    I+   C++ NN  +L V  ++  D  S S ++
Sbjct: 138 GEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGSLKH 182


>12_01_0582 -
           4752576-4752786,4752955-4753037,4753324-4753530,
           4755128-4755207,4756853-4756998,4757088-4757719
          Length = 452

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +2

Query: 344 IGVMDFSDRSYSVDALFLITLPSFLWIPWSNTIDFLVHFSTVMI 475
           +  +DF   +  ++  +L  LPS  W  W + + + VH  ++ I
Sbjct: 392 LSAIDFLKHAADLNTRWLKRLPSNFWATWVHPLTYKVHVKSLWI 435


>03_05_0901 +
           28635672-28636094,28637623-28637802,28637903-28638172,
           28638506-28638757,28639205-28639453,28639533-28639606,
           28639798-28639915,28640421-28640555,28640813-28640965
          Length = 617

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 496 ARAGQKGYHHRTEMNKKIYRIGPRNPQ 416
           +RA   GY + +E N +IYR+  R+P+
Sbjct: 590 SRADNLGYEYMSEQNNEIYRLLLRDPK 616


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,475,024
Number of Sequences: 37544
Number of extensions: 448791
Number of successful extensions: 1089
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)