Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_F14
         (790 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   210   2e-54
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   210   2e-54
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   210   2e-54
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   210   2e-54
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   210   2e-54
BT021953-1|AAX51658.1|  393|Drosophila melanogaster GH07821p pro...    29   9.6  
AE014297-4192|AAF56757.1|  393|Drosophila melanogaster CG12261-P...    29   9.6  

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  210 bits (512), Expect = 2e-54
 Identities = 97/119 (81%), Positives = 106/119 (89%)
 Frame = -2

Query: 450 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 271
           +K   +  GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 293 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 352

Query: 270 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 94
           KRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 353 KRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411



 Score =  158 bits (383), Expect = 9e-39
 Identities = 76/113 (67%), Positives = 83/113 (73%)
 Frame = -1

Query: 769 RAHIMXIQXNXGTIEXXSEMGQRTFWRNXIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 590
           +AH+M IQ N G+IE   +   R      I V +VF QDEMIDC+           TSRW
Sbjct: 188 KAHVMEIQLNGGSIEDKVKWA-REHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 246

Query: 589 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 431
           HTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 247 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 299


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  210 bits (512), Expect = 2e-54
 Identities = 97/119 (81%), Positives = 106/119 (89%)
 Frame = -2

Query: 450 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 271
           +K   +  GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 282 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 341

Query: 270 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 94
           KRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 342 KRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400



 Score =  158 bits (383), Expect = 9e-39
 Identities = 76/113 (67%), Positives = 83/113 (73%)
 Frame = -1

Query: 769 RAHIMXIQXNXGTIEXXSEMGQRTFWRNXIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 590
           +AH+M IQ N G+IE   +   R      I V +VF QDEMIDC+           TSRW
Sbjct: 177 KAHVMEIQLNGGSIEDKVKWA-REHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 235

Query: 589 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 431
           HTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 288


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  210 bits (512), Expect = 2e-54
 Identities = 97/119 (81%), Positives = 106/119 (89%)
 Frame = -2

Query: 450 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 271
           +K   +  GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 269 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 328

Query: 270 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 94
           KRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 329 KRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387



 Score =  158 bits (383), Expect = 9e-39
 Identities = 76/113 (67%), Positives = 83/113 (73%)
 Frame = -1

Query: 769 RAHIMXIQXNXGTIEXXSEMGQRTFWRNXIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 590
           +AH+M IQ N G+IE   +   R      I V +VF QDEMIDC+           TSRW
Sbjct: 164 KAHVMEIQLNGGSIEDKVKWA-REHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 222

Query: 589 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 431
           HTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 223 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 275


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  210 bits (512), Expect = 2e-54
 Identities = 97/119 (81%), Positives = 106/119 (89%)
 Frame = -2

Query: 450 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 271
           +K   +  GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 269 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 328

Query: 270 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 94
           KRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 329 KRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387



 Score =  158 bits (383), Expect = 9e-39
 Identities = 76/113 (67%), Positives = 83/113 (73%)
 Frame = -1

Query: 769 RAHIMXIQXNXGTIEXXSEMGQRTFWRNXIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 590
           +AH+M IQ N G+IE   +   R      I V +VF QDEMIDC+           TSRW
Sbjct: 164 KAHVMEIQLNGGSIEDKVKWA-REHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 222

Query: 589 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 431
           HTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 223 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 275


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  210 bits (512), Expect = 2e-54
 Identities = 97/119 (81%), Positives = 106/119 (89%)
 Frame = -2

Query: 450 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 271
           +K   +  GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 282 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 341

Query: 270 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 94
           KRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 342 KRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400



 Score =  158 bits (383), Expect = 9e-39
 Identities = 76/113 (67%), Positives = 83/113 (73%)
 Frame = -1

Query: 769 RAHIMXIQXNXGTIEXXSEMGQRTFWRNXIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRW 590
           +AH+M IQ N G+IE   +   R      I V +VF QDEMIDC+           TSRW
Sbjct: 177 KAHVMEIQLNGGSIEDKVKWA-REHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 235

Query: 589 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 431
           HTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 288


>BT021953-1|AAX51658.1|  393|Drosophila melanogaster GH07821p
           protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +1

Query: 286 ATLDHHKVV--VYFTIMGETSHRCNGFLRQIILSRCIVFNNFAILFVDSLVQYD 441
           ATLD  K +  +YF + G  S+    F  + +L++C+  + +  +    LVQY+
Sbjct: 157 ATLDTTKRMNQLYFPLEGRQSYTPRMFALEELLAKCLAEHKYEFILDRLLVQYE 210


>AE014297-4192|AAF56757.1|  393|Drosophila melanogaster CG12261-PA
           protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +1

Query: 286 ATLDHHKVV--VYFTIMGETSHRCNGFLRQIILSRCIVFNNFAILFVDSLVQYD 441
           ATLD  K +  +YF + G  S+    F  + +L++C+  + +  +    LVQY+
Sbjct: 157 ATLDTTKRMNQLYFPLEGRQSYTPRMFALEELLAKCLAEHKYEFILDRLLVQYE 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,156,571
Number of Sequences: 53049
Number of extensions: 758225
Number of successful extensions: 2225
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2220
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)