Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_F07
(776 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 160 1e-39
03_01_0547 + 4093196-4093657,4094267-4095148 160 1e-39
03_01_0544 + 4082528-4082989,4083585-4084466 160 1e-39
03_01_0543 + 4076981-4077442,4078145-4079026 160 1e-39
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 50 3e-06
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 50 3e-06
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 49 4e-06
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 46 3e-05
07_03_0634 + 20125242-20125688 29 4.1
11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903 29 5.4
01_02_0102 - 11148219-11148563,11148650-11149534 28 7.2
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 28 9.5
01_06_0950 - 33265653-33265802,33265905-33265961,33266046-332661... 28 9.5
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 160 bits (388), Expect = 1e-39
Identities = 70/104 (67%), Positives = 85/104 (81%)
Frame = -3
Query: 669 ADFTAQVIVXNHPGQISNGYTPVXDCHTAHXACKFAEIKEKVDRRTGKSTEVNPKSIKSG 490
A FT+QVI+ NHPGQI NGY PV DCHT+H A KFAE+ K+DRR+GK E PK +K+G
Sbjct: 326 ASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNG 385
Query: 489 DAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 358
DA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 386 DAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 160 bits (388), Expect = 1e-39
Identities = 70/104 (67%), Positives = 85/104 (81%)
Frame = -3
Query: 669 ADFTAQVIVXNHPGQISNGYTPVXDCHTAHXACKFAEIKEKVDRRTGKSTEVNPKSIKSG 490
A FT+QVI+ NHPGQI NGY PV DCHT+H A KFAE+ K+DRR+GK E PK +K+G
Sbjct: 326 ASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNG 385
Query: 489 DAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 358
DA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 386 DAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 160 bits (388), Expect = 1e-39
Identities = 70/104 (67%), Positives = 85/104 (81%)
Frame = -3
Query: 669 ADFTAQVIVXNHPGQISNGYTPVXDCHTAHXACKFAEIKEKVDRRTGKSTEVNPKSIKSG 490
A FT+QVI+ NHPGQI NGY PV DCHT+H A KFAE+ K+DRR+GK E PK +K+G
Sbjct: 326 ASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNG 385
Query: 489 DAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 358
DA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 386 DAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 160 bits (388), Expect = 1e-39
Identities = 70/104 (67%), Positives = 85/104 (81%)
Frame = -3
Query: 669 ADFTAQVIVXNHPGQISNGYTPVXDCHTAHXACKFAEIKEKVDRRTGKSTEVNPKSIKSG 490
A FT+QVI+ NHPGQI NGY PV DCHT+H A KFAE+ K+DRR+GK E PK +K+G
Sbjct: 326 ASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNG 385
Query: 489 DAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 358
DA +V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V
Sbjct: 386 DAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNV 429
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/96 (30%), Positives = 48/96 (50%)
Frame = -3
Query: 654 QVIVXNHPGQISNGYTPVXDCHTAHXACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIV 475
+V+V + I GY H A + +I +D+ GK ++ P+ +KS A+V
Sbjct: 577 RVLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVV 635
Query: 474 NLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 367
+ P+CV+ F + LGR +R T+AVGV+
Sbjct: 636 QVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/96 (30%), Positives = 48/96 (50%)
Frame = -3
Query: 654 QVIVXNHPGQISNGYTPVXDCHTAHXACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIV 475
+V+V + I GY H A + +I +D+ GK ++ P+ +KS A+V
Sbjct: 577 RVLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVV 635
Query: 474 NLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 367
+ P+CV+ F + LGR +R T+AVGV+
Sbjct: 636 QVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/73 (28%), Positives = 40/73 (54%)
Frame = -3
Query: 576 ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 397
+ +I ++++TGK+++ P+ + S A++ + K +CVE F LGR +R
Sbjct: 578 SASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLRS 637
Query: 396 MRQTVAVGVIKAV 358
T+AVG++ V
Sbjct: 638 QGNTIAVGIVSRV 650
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = -3
Query: 615 GYTPVXDCHTAHXACKFAEIKEKVDRRTGKSTEVNPKS-------IKSGDAAIVNLVPSK 457
GY V H+ C+ ++ E++D + K + K +K+G + + +
Sbjct: 337 GYKAVLHIHSVVEECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNN 396
Query: 456 PLCVESFQEFPPLGRFAVR 400
+C+E+F +FP LGRF +R
Sbjct: 397 LICIENFSDFPQLGRFTLR 415
>07_03_0634 + 20125242-20125688
Length = 148
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Frame = +2
Query: 257 CMKNCAVNS-SSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNS 433
C + A S S++ + A ++A T PP ++LT + L R P G
Sbjct: 35 CANSVAYLSLSAFVMSGRAVASAAATASPPVGVQLTVTSEHSEWSILSPRKTCHPTGKVK 94
Query: 434 WKDSTHRGLE---GTKLTMAASPDLMDXGLTSVDLP 532
WK +E GT P+ G +V LP
Sbjct: 95 WKGRREHFVERLVGTAHLPRRRPERQPQGSGAVPLP 130
>11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903
Length = 1135
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 148 NYKIMLHYKPCKKYXKGMSLXP-FFPSK 228
N M PCKK KGM++ P FF SK
Sbjct: 657 NVNKMSKLNPCKKQKKGMNILPKFFTSK 684
>01_02_0102 - 11148219-11148563,11148650-11149534
Length = 409
Score = 28.3 bits (60), Expect = 7.2
Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Frame = +2
Query: 233 FR*MKYR--SCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRT 406
F+ MK R + N V S S+FLP+V F+A PPP ALM V + R+
Sbjct: 259 FKVMKERMYKIISNAIVVSYSHFLPVVPFNA---FNPPPPEF---ALMKSDPPV-VQRRS 311
Query: 407 AKRPRGGNSWKDSTHRGLEGTKLTMAASPDLMDXGLTSVD 526
R G S H A PD L S D
Sbjct: 312 PHRQTGQGSGGPKIHFEARPDTSNPAGQPDSRKRKLMSSD 351
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 27.9 bits (59), Expect = 9.5
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 317 AALVTLPPPASLKLT-ALMTPTATVCLMSRTAKRPRGGNSWKDSTHRGLEGTKLTMAASP 493
A + L PA + A+ P TV + T ++ RG K +GL G KLT S
Sbjct: 266 ALIYPLVSPAVVSCDIAIAYPMPTVNPVESTPRKGRGRPRKKPVEIKGLSGIKLTEDLST 325
Query: 494 DLMDXGLTSVDLPVRR 541
L LT ++ +R
Sbjct: 326 ALSPIALTCMEPKKKR 341
>01_06_0950 -
33265653-33265802,33265905-33265961,33266046-33266111,
33266252-33266317,33266752-33267217,33267313-33267566
Length = 352
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 419 RGGNSWKDSTHRGLEGTKLTMAASPDLMDXGLTSVDLPVRRSTFSLISANLQAMW 583
+ GN + +G E TK PDL GL V PV ST+++ S + W
Sbjct: 292 KNGNPLQHFQQKGSESTKDAEQPKPDLRSRGLCLV--PV-ASTYTVASETVPEFW 343
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,976,798
Number of Sequences: 37544
Number of extensions: 263894
Number of successful extensions: 740
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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