Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_F07
         (776 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...   202   3e-54
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...   202   3e-54
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...   135   4e-34
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    24   1.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    24   1.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    24   1.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.2  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score =  202 bits (493), Expect = 3e-54
 Identities = 94/108 (87%), Positives = 99/108 (91%)
 Frame = -3

Query: 675 GXADFTAQVIVXNHPGQISNGYTPVXDCHTAHXACKFAEIKEKVDRRTGKSTEVNPKSIK 496
           G ADFTAQVIV NHPGQISNGYTPV DCHTAH ACKFAEIKEK DRRTGK+TE NPKSIK
Sbjct: 336 GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIK 395

Query: 495 SGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 352
           SGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAVGVIK+V F
Sbjct: 396 SGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSVTF 443


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score =  202 bits (493), Expect = 3e-54
 Identities = 94/108 (87%), Positives = 98/108 (90%)
 Frame = -3

Query: 675 GXADFTAQVIVXNHPGQISNGYTPVXDCHTAHXACKFAEIKEKVDRRTGKSTEVNPKSIK 496
           G ADFTAQVIV NHPGQISNGYTPV DCHTAH ACKFA+IKEK DRR GK+TE NPKSIK
Sbjct: 336 GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIK 395

Query: 495 SGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 352
           SGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 396 SGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score =  135 bits (327), Expect = 4e-34
 Identities = 63/73 (86%), Positives = 65/73 (89%)
 Frame = -3

Query: 675 GXADFTAQVIVXNHPGQISNGYTPVXDCHTAHXACKFAEIKEKVDRRTGKSTEVNPKSIK 496
           G ADFTAQVIV NHPGQISNGYTPV DCHTAH ACKFAEIKEK DRRTGK+TE NPKSIK
Sbjct: 47  GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIK 106

Query: 495 SGDAAIVNLVPSK 457
           SGDAAIV L P+K
Sbjct: 107 SGDAAIVMLQPTK 119


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 245 KYRSCMKNCAVNSSSYFLPLVAFS 316
           K+  C+KN A   SSYF+  + F+
Sbjct: 94  KFYDCLKNSADTISSYFVGKMYFN 117


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 245 KYRSCMKNCAVNSSSYFLPLVAFS 316
           K+  C+KN A   SSYF+  + F+
Sbjct: 99  KFYDCLKNSADTISSYFVGKMYFN 122


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 245 KYRSCMKNCAVNSSSYFLPLVAFS 316
           K+  C+KN A   SSYF+  + F+
Sbjct: 99  KFYDCLKNSADTISSYFVGKMYFN 122


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 206 CXPFFLRNTFR*MKYRSCMKN 268
           C  FF R+  + ++YR C KN
Sbjct: 87  CKGFFRRSIQQKIQYRPCTKN 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,006
Number of Sequences: 438
Number of extensions: 2834
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)