Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_F06
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 0.78
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 31 1.0
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 31 1.4
12_01_0302 - 2286171-2286341,2286747-2286968 29 4.2
10_01_0075 - 979335-979954,980136-980405,980949-980989,981563-98... 29 4.2
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.5
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.5
11_06_0069 + 19770182-19770379,19770470-19772703,19772789-197730... 28 7.3
11_04_0270 - 15590955-15591146,15591421-15591502,15591592-155917... 28 7.3
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 28 7.3
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 28 7.3
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 28 7.3
08_01_0440 + 3875422-3875619,3875710-3876382,3876449-3877943,387... 28 7.3
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 28 7.3
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 28 7.3
02_01_0374 - 2702804-2702995,2703270-2703351,2703441-2703551,270... 28 7.3
05_07_0082 + 27575924-27576917,27577371-27577732 28 9.6
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 31.5 bits (68), Expect = 0.78
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = -1
Query: 650 HTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSA-YLTPSSLGMXKGVSPPYFQ 480
++PT+P TS + +P +P +PG P S +PS+ PSS+ +
Sbjct: 1766 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSS 1825
Query: 479 VNDESQASRLISRHSP-YSAPLLQLTPSSK 393
N S S S SP YS P +P+S+
Sbjct: 1826 PNYYSSTSPTYSPTSPSYSQPSPSYSPTSR 1855
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 31.1 bits (67), Expect = 1.0
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Frame = -1
Query: 650 HTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSS--LGMXKGVSPPYF 483
++PT+P TS S +P +P +P P + +PS +PSS L SP Y
Sbjct: 1718 YSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYS 1777
Query: 482 QVNDE-SQASRLISRHSPYSAPLLQLTPSSKTS 387
+ S S S+ SP +P T S S
Sbjct: 1778 PTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPS 1810
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -1
Query: 623 SISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLIS 444
+I +P+T +F+P + S PS TPSS G SP Y S S S
Sbjct: 1515 NIRASPITD--AQFSPYVGGMAFSPVPSPGYTPSSGGGYSPSSPVYSPGPGYSPTSPSYS 1572
Query: 443 RHSP-YSAPLLQLTPSSKTSS 384
SP YS TP S T S
Sbjct: 1573 PASPSYSPTSPSYTPGSPTYS 1593
>12_02_0228 +
15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 30.7 bits (66), Expect = 1.4
Identities = 28/93 (30%), Positives = 35/93 (37%)
Frame = -1
Query: 698 PLRXRXHQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSS 519
PLR R H P TT +++ L A P S S Y TP+
Sbjct: 193 PLRLRLHDPSVLSKSIEANTTQITRPPTLSLLAS-----ARNHAPTTSDRLGSNYTTPNR 247
Query: 518 LGMXKGVSPPYFQVNDESQASRLISRHSPYSAP 420
+ K S PYF+ S+ L SPY AP
Sbjct: 248 SAIYKMSSSPYFKSAVSSR--DLFGTVSPYQAP 278
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 81 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 182
RL+R RK + D+ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>10_01_0075 -
979335-979954,980136-980405,980949-980989,981563-981663
Length = 343
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = -1
Query: 716 MHQATXPLRXRXHQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPP 561
M AT LR HQP+ Q H P+ P I+P P +E P +KPP
Sbjct: 142 MMPATHTLRMLQHQPEPQPQLQHPPSPPHPKEECISP--PLMEENVP-VKPP 190
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 73 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 219
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -3
Query: 240 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 61
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 60 ILHSF 46
+LHSF
Sbjct: 1408 LLHSF 1412
>11_06_0069 +
19770182-19770379,19770470-19772703,19772789-19773040,
19773121-19773231,19773321-19773402,19773677-19773868
Length = 1022
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 674 PDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 495
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 574 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 628
Query: 494 PPYFQVNDESQASRLISR-HSP 432
PP Q + + S L+ + H P
Sbjct: 629 PPSVQTSPPTPQSALVEQVHIP 650
>11_04_0270 -
15590955-15591146,15591421-15591502,15591592-15591702,
15591783-15592034,15592120-15594353,15594444-15594641
Length = 1022
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 674 PDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 495
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 574 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 628
Query: 494 PPYFQVNDESQASRLISR-HSP 432
PP Q + + S L+ + H P
Sbjct: 629 PPSVQTSPPTPQSALVEQVHIP 650
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 674 PDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 495
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 574 PEPPSPR-HLPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 628
Query: 494 PPYFQVNDESQASRLISR-HSP 432
PP Q + + S L+ + H P
Sbjct: 629 PPSVQTSPPTPQSALVEQVHIP 650
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 674 PDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 495
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 482 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPAPQPVQASPTSPAKQHAPPA 536
Query: 494 PPYFQVNDESQASRLISR-HSP 432
PP Q + + S L+ + H P
Sbjct: 537 PPSVQTSPPTPQSALVEQVHIP 558
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 674 PDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 495
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 418 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPAPQPVQASPTSPAKQHAPPA 472
Query: 494 PPYFQVNDESQASRLISR-HSP 432
PP Q + + S L+ + H P
Sbjct: 473 PPSVQTSPPTPQSALVEQVHIP 494
>08_01_0440 +
3875422-3875619,3875710-3876382,3876449-3877943,
3878029-3878280,3878361-3878471,3878561-3878642,
3878917-3879108
Length = 1000
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 674 PDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 495
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 552 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 606
Query: 494 PPYFQVNDESQASRLISR-HSP 432
PP Q + + S L+ + H P
Sbjct: 607 PPSVQTSPPTPQSALVEQVHIP 628
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 674 PDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 495
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 574 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 628
Query: 494 PPYFQVNDESQASRLISR-HSP 432
PP Q + + S L+ + H P
Sbjct: 629 PPSVQTSPPTPQSALVEQVHIP 650
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 674 PDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 495
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 487 PEPPSPR-HQPSPPPLRSPPRQPTPPP----SPSQQPPLPAPQPVQASPTSPAKQHAPPA 541
Query: 494 PPYFQVNDESQASRLISR-HSP 432
PP Q + + S L+ + H P
Sbjct: 542 PPSVQTSPPTPQSALVEQVHIP 563
>02_01_0374 -
2702804-2702995,2703270-2703351,2703441-2703551,
2703632-2703883,2703969-2704798,2704895-2706202,
2706293-2706490
Length = 990
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 674 PDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 495
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 542 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 596
Query: 494 PPYFQVNDESQASRLISR-HSP 432
PP Q + + S L+ + H P
Sbjct: 597 PPSVQTSPPTPQSALVEQVHIP 618
>05_07_0082 + 27575924-27576917,27577371-27577732
Length = 451
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -1
Query: 563 PLSSEAPSAYLTPSSLGMXKGVSPP---YFQVNDESQASRLISRHSPYSAPLLQLTPSSK 393
PL +A SS G+ + P Y+Q N E+Q RHSP + P
Sbjct: 28 PLEPKAEPQVEESSSKGVSQTPEAPFVHYYQTNAENQEHSSKQRHSPAAPPFGNFWGQPG 87
Query: 392 TSSWP 378
+SS P
Sbjct: 88 SSSVP 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,616,589
Number of Sequences: 37544
Number of extensions: 420222
Number of successful extensions: 1219
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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