Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_F06
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U40030-2|AAR12978.2|  292|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical ...    28   6.6  
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    28   8.7  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   8.7  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   8.7  

>Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical
           protein C34E11.2 protein.
          Length = 677

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
 Frame = -1

Query: 680 HQPDH--QIPRFH--TPTTPD-LTSISINPL-TPY*KEFAPGLKPPL--SSEAPSAYLTP 525
           H P+H   +PR    TP     L ++   P+ TP     A  L PP+  SS  P    TP
Sbjct: 446 HTPEHVCPLPRSFSSTPAAEQFLPTLEGAPVWTPSAVSTASELSPPIPMSSPPPPLPRTP 505

Query: 524 SSLGMXKGVSPPYFQVNDESQASRLISRHSPY------SAPLLQLTPSSKTSS 384
                    S PY Q+N+    +R  +R   +      S+P+L  T  +++S+
Sbjct: 506 QPNNGLPNASLPYNQINNAGSFTRTAARRWKFTSVEARSSPILHATDQTRSSA 558


>U40030-2|AAR12978.2|  292|Caenorhabditis elegans Hypothetical
           protein T13C2.7 protein.
          Length = 292

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 563 PLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSPYSAP 420
           PL+S++  +Y   +SL +    S    QV DE++     +R S  SAP
Sbjct: 139 PLNSDSTRSYKNENSLNVPFTTSQQAIQVEDETRTGTSSTRQSVCSAP 186


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/76 (27%), Positives = 29/76 (38%)
 Frame = -1

Query: 611 NPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSP 432
           NP TP     +  +  P +S      L     G      PP  Q     Q  +++S   P
Sbjct: 190 NPATP--SSSSQPIPSPSASSIAEESLDDKPSGTKMPAQPPPQQHPPPPQPQQIMSPMPP 247

Query: 431 YSAPLLQLTPSSKTSS 384
            + P  Q TPSS  +S
Sbjct: 248 QAPPSQQATPSSSAAS 263


>AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical
           protein F49F1.1 protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -1

Query: 662 IPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 540
           +P   T  TP+LT++++ P+T   K     + P  +++ P+
Sbjct: 173 VPLVLTTLTPELTTVTVEPITSTLKPTTTTITPTTTTKLPT 213


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = -1

Query: 659 PRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSLGMXKGVSPPYF 483
           PR     TP L  + I+P+     +F P + PP    +P  A   P++L      S P  
Sbjct: 525 PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNT 584

Query: 482 QVNDESQASRLISR 441
            V ++      ++R
Sbjct: 585 YVPNQESFDESVNR 598


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = -1

Query: 659 PRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSLGMXKGVSPPYF 483
           PR     TP L  + I+P+     +F P + PP    +P  A   P++L      S P  
Sbjct: 525 PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNT 584

Query: 482 QVNDESQASRLISR 441
            V ++      ++R
Sbjct: 585 YVPNQESFDESVNR 598


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 563  PLSSEAPSAYLTPSSLGMXKGVSPP 489
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 563  PLSSEAPSAYLTPSSLGMXKGVSPP 489
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,662,364
Number of Sequences: 27780
Number of extensions: 318813
Number of successful extensions: 980
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)