Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_E24
         (820 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0311 + 7164774-7166327                                           30   2.5  
06_01_0295 - 2154069-2155483,2155561-2155708                           29   5.9  
01_01_0278 - 2281536-2281977,2282523-2282926                           29   5.9  
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026...    28   7.8  

>09_02_0311 + 7164774-7166327
          Length = 517

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 3   FFFFFISAARVYCLSALFIILRPRSTALPSADVAAVW 113
           F  FF  A  V  ++A   +  P +  +P  D+AAVW
Sbjct: 453 FVLFFFFAGWVAAMTAFVALFVPETKGVPIEDMAAVW 489


>06_01_0295 - 2154069-2155483,2155561-2155708
          Length = 520

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 6   FFFFISAARVYCLSALFIILRPRSTALPSADVAAVW 113
           FFFF  AA +  ++A   +L P +  +P  +VA VW
Sbjct: 462 FFFF--AAWLAAMTAFVYLLLPETKGVPIEEVAGVW 495


>01_01_0278 - 2281536-2281977,2282523-2282926
          Length = 281

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = -3

Query: 341 DRAPPPPLRSLISNLSNTCDLT 276
           DR P P   SLISN SNT  LT
Sbjct: 199 DRPPSPSQSSLISNQSNTSTLT 220


>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
            18303723-18303836,18303903-18304046,18316147-18316312,
            18316396-18317130,18317219-18317422,18317496-18318177,
            18318272-18318528,18318604-18319298,18319345-18319382,
            18319847-18319928,18320018-18320112,18320443-18320526,
            18320601-18320891,18321521-18321853,18321948-18322150,
            18322243-18322399,18322482-18322585,18322675-18322835,
            18323511-18323824,18324317-18324589,18324666-18324967,
            18325459-18325549,18326140-18326190,18326700-18326768,
            18326926-18327017,18327082-18327148,18328582-18328746,
            18329027-18329103,18329572-18329766,18330208-18330275,
            18331081-18331172,18331399-18331522,18331608-18331705,
            18332384-18332997,18333620-18333626
          Length = 2892

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 238  HHALCSHDHSGSGVRSQVLERLEMRLRSGGGGARS 342
            H A C+ D  G GVR + +     RLR+G  G+R+
Sbjct: 1373 HEAHCAQDRRGDGVRPRQIR----RLRAGEAGSRA 1403


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,147,211
Number of Sequences: 37544
Number of extensions: 186650
Number of successful extensions: 698
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)