Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_E22
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   5.5  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   9.5  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   9.5  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   9.5  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 343 CKGY*I*WIRKDMSRASTVTGSCMI 417
           CKG+    +RKD+S A     SC+I
Sbjct: 130 CKGFFKRTVRKDLSYACREEKSCII 154


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 343 CKGY*I*WIRKDMSRASTVTGSCMI 417
           CKG+    +RKD+S A     SC+I
Sbjct: 130 CKGFFKRTVRKDLSYACREEKSCII 154


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 166 QLLLSC*VSFGGARAVVSKSTPL 98
           +LL SC  + GG  ++V  STP+
Sbjct: 916 ELLSSCVSNDGGCSSLVDVSTPV 938


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 418 RIRGVVSGGYDKAIIMTHSLIEVPF 492
           R+ G   GG+  +II    +I++PF
Sbjct: 4   RMTGTWVGGFCHSIIQIPVIIQLPF 28


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 640 RGPHTHRHPSI 608
           RGP THR P +
Sbjct: 323 RGPRTHRMPQL 333


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 278 LDKEVDVQPNPCISPLSFSPDL 213
           +D  +DV PN C +  ++  DL
Sbjct: 173 VDLVIDVDPNNCDNTYAYISDL 194


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,180
Number of Sequences: 438
Number of extensions: 3637
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)