Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_E13
(856 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 42 1e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.010
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 35 0.017
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 35 0.017
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.090
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.090
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.090
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.16
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 0.84
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.6
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.4
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 3.4
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 27 4.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 7.8
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 41.9 bits (94), Expect = 1e-04
Identities = 25/84 (29%), Positives = 31/84 (36%)
Frame = +2
Query: 527 APLSXPXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXP 706
AP S P PP PPT + AP P + P+ PS+ PP P+ P
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI--PSSLPPPAQPAAP 180
Query: 707 SRPPPPXXGXRXAPXPAPSPXAXP 778
+ PP A P P P
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 28.7 bits (61), Expect = 1.1
Identities = 27/103 (26%), Positives = 31/103 (30%)
Frame = +3
Query: 405 LSHXGGXXXRXAPGFXXXXXPPSXGPRXLXPPXLLPRXXAGLPSLXPAPRXGXAXPLLLX 584
L H G AP PP+ P PR PS AP P +
Sbjct: 112 LRHIGKSSASAAP--PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI-P 168
Query: 585 XXXXXPXLPLXXSLRPXTIPSDXGLXXXPPPRXPPPXPPXLPV 713
P P P + PS PP+ PPP PV
Sbjct: 169 SSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPV 211
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 6/37 (16%)
Frame = +3
Query: 669 PPPRXP------PPXPPXLPVLXPPXGVXXLPPSLPP 761
PPP P PP P LP PP +PP +PP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPP-----MPPKVPP 203
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.1 bits (82), Expect = 0.003
Identities = 23/79 (29%), Positives = 27/79 (34%)
Frame = +2
Query: 542 PXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPP 721
P P P P+ A V P P P P+ PS PP P + PP
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP-PSEAPPVPKPSVGVPPVPPPSTA-PPV 1219
Query: 722 PXXGXRXAPXPAPSPXAXP 778
P P P P+ A P
Sbjct: 1220 PTPSAGLPPVPVPTAKAPP 1238
Score = 36.7 bits (81), Expect = 0.004
Identities = 25/83 (30%), Positives = 29/83 (34%)
Frame = +2
Query: 530 PLSXPXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPS 709
P+ PP + PP + P A PAP + P APS P PS
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIP--APSGAPPVPAPS--G 1090
Query: 710 RPPPPXXGXRXAPXPAPSPXAXP 778
PP P P P PS P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPP 1113
Score = 35.9 bits (79), Expect = 0.007
Identities = 22/79 (27%), Positives = 27/79 (34%)
Frame = +2
Query: 527 APLSXPXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXP 706
AP P P P P+ P + P P + P+ PS PP P+
Sbjct: 1062 APPPVPAPSSEIPSIPAPS--GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP-VPAPS 1118
Query: 707 SRPPPPXXGXRXAPXPAPS 763
PP P P P PS
Sbjct: 1119 GAPPVPKPSVAAPPVPVPS 1137
Score = 35.9 bits (79), Expect = 0.007
Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 1/83 (1%)
Frame = +2
Query: 533 LSXPXPPXXXGXTP-PPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPS 709
++ P P G P P A P P P + P+ APS P PS +
Sbjct: 1109 VAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSV-A 1167
Query: 710 RPPPPXXGXRXAPXPAPSPXAXP 778
PP P P P P+ P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPP 1190
Score = 35.5 bits (78), Expect = 0.010
Identities = 27/86 (31%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Frame = +2
Query: 527 APLSX-PXPPXXXGXTPPPTXXAXXXXP-XAXXVSPAPHYPLRXXPLXAPSAXXPPXXPS 700
AP S P P G P P P + P P + P+ APS P PS
Sbjct: 1068 APSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPS 1127
Query: 701 XPSRPPPPXXGXRXAPXPAPSPXAXP 778
+ P P G P P PS A P
Sbjct: 1128 VAAPPVPVPSG--APPVPKPSVAAPP 1151
Score = 35.5 bits (78), Expect = 0.010
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = +2
Query: 542 PXPPXXXGXTPPPTXXAXXXX-PXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPP 718
P P G P P A P P P + P+ PS P PS PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSA-GLPP 1228
Query: 719 PPXXGXRXAPXPAPSPXA 772
P + P PAPS A
Sbjct: 1229 VPVPTAKAPPVPAPSSEA 1246
Score = 35.1 bits (77), Expect = 0.013
Identities = 23/83 (27%), Positives = 28/83 (33%), Gaps = 1/83 (1%)
Frame = +2
Query: 533 LSXPXPPXXXGXTP-PPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPS 709
++ P P G P P A P P P + P+ APS+ PP
Sbjct: 1128 VAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Query: 710 RPPPPXXGXRXAPXPAPSPXAXP 778
PP P P P PS P
Sbjct: 1188 VPPVPPPS-EAPPVPKPSVGVPP 1209
Score = 34.7 bits (76), Expect = 0.017
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = +2
Query: 527 APLSXPXPPXXXGXTPP-PTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSX 703
AP P P PP P P +P P P+ PS PP
Sbjct: 1116 APSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS 1175
Query: 704 PSRPPPPXXGXRXAPXPAPS 763
PP P P P PS
Sbjct: 1176 SGIPPVPKPAAGVPPVPPPS 1195
Score = 34.3 bits (75), Expect = 0.022
Identities = 26/81 (32%), Positives = 29/81 (35%)
Frame = +2
Query: 536 SXPXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRP 715
S PP T PP P S AP P P+ APS+ P P+ P
Sbjct: 1028 SADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP---PPVPAPSSEIPSI-PAPSGAP 1083
Query: 716 PPPXXGXRXAPXPAPSPXAXP 778
P P P P PS A P
Sbjct: 1084 PVPAPSG-IPPVPKPSVAAPP 1103
Score = 34.3 bits (75), Expect = 0.022
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Frame = +2
Query: 527 APLSXPXPPXXXGXTPP--PTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPS 700
AP P P PP A P P P + P+ PS P PS
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Query: 701 XPSRPPPPXXGXRXAPXPAPSPXAXP 778
+ P P G P P PS A P
Sbjct: 1147 VAAPPVPAPSG--APPVPKPSVAAPP 1170
Score = 31.1 bits (67), Expect = 0.21
Identities = 21/78 (26%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Frame = +2
Query: 542 PXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXX---PLXAPSAXXPPXXPSXPSR 712
P P + P P S AP PL P+ PS P P+
Sbjct: 992 PSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPP 1051
Query: 713 PPPPXXGXRXAPXPAPSP 766
P G AP P P+P
Sbjct: 1052 VPKSSSGAPSAPPPVPAP 1069
Score = 31.1 bits (67), Expect = 0.21
Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Frame = +2
Query: 542 PXP-PXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPP 718
P P P P P+ A + + P P P+ PS P PS P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV 1210
Query: 719 PPXXGXRXAPXPAPSPXAXP 778
PP P P PS P
Sbjct: 1211 PPP--STAPPVPTPSAGLPP 1228
Score = 30.7 bits (66), Expect = 0.28
Identities = 24/80 (30%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Frame = +2
Query: 527 APLSXPXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXP 706
APL+ P PP P S AP P+ P P P P
Sbjct: 1006 APLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPI---PTSTPPV--PKSSSGAP 1060
Query: 707 SRPPP-PXXGXRXAPXPAPS 763
S PPP P PAPS
Sbjct: 1061 SAPPPVPAPSSEIPSIPAPS 1080
Score = 30.3 bits (65), Expect = 0.36
Identities = 20/74 (27%), Positives = 24/74 (32%)
Frame = +2
Query: 542 PXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPP 721
P P P P+ P + P P P+ P+A PP P PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKP-SVAAPPVPAPSSGIPPVPKPAAGVPPVPPP-SEAPPV 1200
Query: 722 PXXGXRXAPXPAPS 763
P P P PS
Sbjct: 1201 PKPSVGVPPVPPPS 1214
Score = 29.9 bits (64), Expect = 0.48
Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Frame = +2
Query: 530 PLSXPXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPL-RXXPLXAPSAXXPPXXPSXP 706
P P T P P + VS +P PL R P+ S+ PP P
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPV--PLP 1027
Query: 707 SRPPPPXXGXRXAPXPAPSPXAXP 778
S PP AP P P P + P
Sbjct: 1028 SADAPPIPVPSTAP-PVPIPTSTP 1050
Score = 29.1 bits (62), Expect = 0.84
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 8/92 (8%)
Frame = +3
Query: 522 AGLPSLXPAPRXGXAXPLLLXXXXXXPXLPLXXSLRPXTIPSD---XGLXXXPPPRXPPP 692
A L + P P+ P + P +P+ + P IP+ P PPP
Sbjct: 1006 APLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Query: 693 XP---PXLPVLXPPXGVXXLP-PS-LPPXLXP 773
P +P + P G +P PS +PP P
Sbjct: 1066 VPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 29.1 bits (62), Expect = 0.84
Identities = 26/105 (24%), Positives = 35/105 (33%), Gaps = 7/105 (6%)
Frame = +3
Query: 465 PPSXGPRXLXPPXLLPRXXAGLP---SLXPAPRXGX----AXPLLLXXXXXXPXLPLXXS 623
PP P PP +P +P S P P+ A P + P +P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 624 LRPXTIPSDXGLXXXPPPRXPPPXPPXLPVLXPPXGVXXLPPSLP 758
P +P+ G+ P P P P V PP P +P
Sbjct: 1082 APP--VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 28.7 bits (61), Expect = 1.1
Identities = 26/104 (25%), Positives = 32/104 (30%), Gaps = 5/104 (4%)
Frame = +3
Query: 465 PPSXGPRXLXPPXLLPRXXAGLP----SLXPAPRXGXAXPLLLXXXXXXPXLPLXXSLRP 632
PP P PP P +P + P P P + P +P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 633 XTIPSDXGLXXXPPPRX-PPPXPPXLPVLXPPXGVXXLPPSLPP 761
PS G+ PPP PP P + P PP P
Sbjct: 1200 VPKPS-VGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = +2
Query: 563 GXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSR--PPPPXXGX 736
G P P + +S P + P AP + P+ P PP P
Sbjct: 960 GPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSS 1019
Query: 737 RXAPXPAPSPXAXP 778
+ P P PS A P
Sbjct: 1020 KAPPVPLPSADAPP 1033
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +2
Query: 542 PXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPP 721
P P PPP+ P A + P P + P+ APS+ P S P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAG-LPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 636 TIPSDXGLXXXPP-PRXPPPXPPXLPVLXPPXGVXXLPPSLPPXLXP 773
T PS+ G P P PP PP LPV + P S PP P
Sbjct: 949 TRPSNDGRKASGPRPAAPPSIPPPLPV----SNILSSPTSEPPKDHP 991
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.010
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Frame = +2
Query: 527 APLSXPXPPXXXGXTPP-PTXXAXXXX-PXAXXVSPAPHYPLRXX--PLXAPSAXXPPXX 694
AP P TPP PT + P + S P P+ P PSA P
Sbjct: 400 APALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL 459
Query: 695 PSX-PSRPPPPXXGXRXAPXPAPSPXA 772
P+ P+ PP P P PAP+P A
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Score = 30.7 bits (66), Expect = 0.28
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 669 PPPRXPPPXPPXLPVLXPPXGVXXLPPSLPPXLXP 773
P PP PP +P PP V L PP + P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPP 258
Score = 29.5 bits (63), Expect = 0.64
Identities = 28/105 (26%), Positives = 34/105 (32%), Gaps = 2/105 (1%)
Frame = +3
Query: 465 PPSXGPRXLXPPXLLPRXXA-GLPSLXPAPRXGXAXPLLLXXXXXXPXLPLXXSLR-PXT 638
PP+ PR + P + P + P L P A L P P R
Sbjct: 267 PPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
Query: 639 IPSDXGLXXXPPPRXPPPXPPXLPVLXPPXGVXXLPPSLPPXLXP 773
I + PPP PP + PP G PP PP P
Sbjct: 327 IGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG-RSAPPPPPPRSAP 370
Score = 29.5 bits (63), Expect = 0.64
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 4/83 (4%)
Frame = +2
Query: 542 PXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXP--SXPS-- 709
P PP PP P PL PP P S PS
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 710 RPPPPXXGXRXAPXPAPSPXAXP 778
R PPP R P P A P
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIP 396
Score = 27.5 bits (58), Expect = 2.6
Identities = 36/119 (30%), Positives = 41/119 (34%), Gaps = 16/119 (13%)
Frame = +3
Query: 465 PPSXGPRXLXPPXLLPRXXAGLPSLXPAPRXGXAXPLLLXXXXXX-PXLPLXXSL----- 626
PPS R PP + LP P PR A + L P P S
Sbjct: 316 PPSRRNRG-KPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR 374
Query: 627 RPXTIPSDXGLXXXP--PPRXPPPXPPXLPVL-------XPPXGV-XXLPPSLPPXLXP 773
+P + S + P PP P P LP L PP LPPS PP L P
Sbjct: 375 QPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 27.1 bits (57), Expect = 3.4
Identities = 26/103 (25%), Positives = 28/103 (27%), Gaps = 1/103 (0%)
Frame = +3
Query: 441 PGFXXXXXPP-SXGPRXLXPPXLLPRXXAGLPSLXPAPRXGXAXPLLLXXXXXXPXLPLX 617
PG PP R PP P LP P A P L P LP
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTP---PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Query: 618 XSLRPXTIPSDXGLXXXPPPRXPPPXPPXLPVLXPPXGVXXLP 746
+ P PP PP P P + LP
Sbjct: 453 APIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAELP 495
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 34.7 bits (76), Expect = 0.017
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = +2
Query: 542 PXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPP 721
P P P A P A V P P+ L P P P PS P P
Sbjct: 533 PAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQP 592
Query: 722 PXXGXRXAPXPAPSPXAXPXA 784
P P P P A
Sbjct: 593 PVAPVVPEAPSVPQPPVAPVA 613
Score = 34.3 bits (75), Expect = 0.022
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = +2
Query: 536 SXPXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRP 715
S P PP P+ P A V P P APS PP P P P
Sbjct: 588 SVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVP 647
Query: 716 PPPXXGXRXAPXPAPSPXAXPXA 784
P APS P A
Sbjct: 648 SVPQRPAVPVVPEAPSVPQPPAA 670
Score = 30.3 bits (65), Expect = 0.36
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = +2
Query: 542 PXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPP 721
P P P A P A V P P+ P P P PS P P
Sbjct: 608 PVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQP 667
Query: 722 PXXGXRXAPXPAPSPXAXP 778
P P P A P
Sbjct: 668 PAAPVVPEVPSVPQPPAVP 686
Score = 29.9 bits (64), Expect = 0.48
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +2
Query: 605 PXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPPPXXGXRXAPXPAPSPXAXPXA 784
P A V P P+ APS PP P P P P APS P A
Sbjct: 581 PVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAA 640
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +2
Query: 575 PPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPPPXXGXRXA-PX 751
PP P AP P P+A P PS P RP P + P
Sbjct: 517 PPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQ 576
Query: 752 PAPSPXA 772
P +P A
Sbjct: 577 PPVAPVA 583
Score = 27.1 bits (57), Expect = 3.4
Identities = 25/103 (24%), Positives = 30/103 (29%), Gaps = 3/103 (2%)
Frame = +2
Query: 425 LSPXGXRXXLXPXPPLXXXXXXXXXXXXXXXXXXAPLSXPXPPXXXGXTPPPTXXAXXXX 604
++P P PP+ AP P P P +
Sbjct: 579 VAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAP-EVPSVPQRPAVPVVPEAPSVPQP 637
Query: 605 PXAXXVSPAPHYPLRXX-PLX--APSAXXPPXXPSXPSRPPPP 724
P A V P P R P+ APS PP P P P P
Sbjct: 638 PAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVP 680
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 34.7 bits (76), Expect = 0.017
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 760 GGRXGGXXXTPXGGXRTGRXGGXGGGXRGGG-XXXRPXSEGIVXGR 626
GG GG GG G GG GGG RGG R S G GR
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRGR 193
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/66 (30%), Positives = 22/66 (33%)
Frame = -2
Query: 852 GRXXGGXGGDGEXXVGGXGQGXXAXGXAXGEGAGXGAXRXPXXGGGGREGXEGXXGGXXA 673
G G G G G G+G G G G GGG R G G G +
Sbjct: 129 GARNGPAGRGGRGGFRG-GRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRG-GS 186
Query: 672 EGAXRG 655
G RG
Sbjct: 187 RGGFRG 192
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.090
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = +2
Query: 548 PPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPPPX 727
PP PP A P V P P P P PSA PP S S P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP--PMPAGPPSAPPPPLPAS--SAPSVPN 1745
Query: 728 XGXRXA 745
G R A
Sbjct: 1746 PGDRSA 1751
Score = 31.9 bits (69), Expect = 0.12
Identities = 29/89 (32%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Frame = +2
Query: 527 APLSXPXPPXXXGXTPPPTXXAXXXXPXAXXV-SPAPHYPLRXXPLXAPSAXXPPXXPS- 700
AP S P PP PP A P + S A P P APS+ PP S
Sbjct: 1471 APSSAPAPPAPVSQLPP----AVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSF 1526
Query: 701 --XPS-RPPPPXXGXRXAPXPAPSPXAXP 778
PS PP P A AP+ + P
Sbjct: 1527 AHVPSPAPPAPQHPSAAALSSAPADNSMP 1555
Score = 31.1 bits (67), Expect = 0.21
Identities = 23/84 (27%), Positives = 27/84 (32%)
Frame = +2
Query: 527 APLSXPXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXP 706
AP P P P A +PAP P+ P P+ P PS
Sbjct: 1443 APQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVA 1502
Query: 707 SRPPPPXXGXRXAPXPAPSPXAXP 778
+PP AP APS P
Sbjct: 1503 QQPP-----SSVAPATAPSSTLPP 1521
Score = 30.3 bits (65), Expect = 0.36
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 629 APHYPLRXXPLXAPSAXXPPXXPSXPSRPPPPXXGXRXAPXPAPSPXAXPXA 784
AP +P+ P+ SA P S P+ PPPP P P P P A
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQM--SAPT-PPPPPMSVPPPPSAPPMPAGPPSA 1730
Score = 30.3 bits (65), Expect = 0.36
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = +2
Query: 611 AXXVSPAPHYPLRXXP--LXAPSAXXPPXX-PSXPSRPPPPXXGXRXAPXPAPSPXA 772
A VS P P P + AP+ PP P PS PP P P P P+ A
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSA 1740
Score = 29.1 bits (62), Expect = 0.84
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = +2
Query: 575 PPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPPPXXGXRXAPXP 754
PP P +P P P+ P PSA PP PS PPPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPP-PMSVPP--PPSA--PPMPAGPPSAPPPPLPASSAPSVP 1744
Query: 755 AP 760
P
Sbjct: 1745 NP 1746
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 669 PPPRXPPPXPPXLPVLXPPXGVXXLPPSLP 758
PPP PP P P PP PS+P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.090
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = -2
Query: 840 GGXGGDGEXXVGGXGQGXXAXGXAXGEGAGXGAXRXPXXGGGGREGXEGXXGG 682
GG GG+G G G G G G G G P GGG G G GG
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG---PGGFGGGLGGFGGGPGG 260
Score = 27.9 bits (59), Expect = 1.9
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = -2
Query: 837 GXGGDGEXXVGGXGQGXXAXGXAXGEGAGXGAXRXPXXG-GGGREGXEGXXGGXXAEGAX 661
G GG G GG G G G G G G G GGG G G GG
Sbjct: 203 GPGGFG--GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
Query: 660 RGXXRRG*XGAG 625
G G G G
Sbjct: 261 FGGGPGGHGGPG 272
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.090
Identities = 18/69 (26%), Positives = 22/69 (31%)
Frame = +2
Query: 572 PPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPPPXXGXRXAPX 751
PPP P + P P+ P P P PPPP +
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 752 PAPSPXAXP 778
AP+P A P
Sbjct: 793 YAPAPQAEP 801
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +2
Query: 623 SPAPHYPLRXXPLXAPSAXXPPXXPSXPSRPPPPXXGXRXAPXPAPSPXAXPXA 784
SP P P P AP+ P PPPP A P P P A
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -2
Query: 840 GGXGGDGEXXVG-GXGQGXXAXGXAXGEGAGXGAXRXPXXGGGGREGXEGXXGG 682
GG GG G G+G G G G G R G GG G G G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 30.7 bits (66), Expect = 0.28
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 760 GGRXGGXXXTPXGGXRTGRXGGXGG--GXRGGGXXXRPXSEG 641
GG GG GG R GR GG GG G RGG R ++G
Sbjct: 29 GGGRGGARGGGRGGARGGR-GGRGGARGGRGGSSGGRGGAKG 69
Score = 30.3 bits (65), Expect = 0.36
Identities = 26/77 (33%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Frame = -1
Query: 760 GGRXGGXXXTPXGGXRTGRXGGXGGGXRGGGXXXRPXSEGIVXGRRDXXSGRXGXXXXXX 581
GGR G G GG GG RGGG R + G GR GR G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGG---RGGARGGRGGRGGARGGRGGSSGGRG 65
Query: 580 RRRGXA----XPXRGAG 542
+G A P R AG
Sbjct: 66 GAKGGAKVIIEPHRHAG 82
Score = 30.3 bits (65), Expect = 0.36
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = -2
Query: 852 GRXXGGXGGDGEXXVGGXGQGXXAXGXAXGEGAGXGAXRXPXXGG--GGREGXEGXXGG 682
G G GG G GG G G A G G G GG GGR G G GG
Sbjct: 9 GGRGGSRGGRGGFN-GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 29.9 bits (64), Expect = 0.48
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 778 RXGXRXGGRXGGXXXT-PXGGXRTGRXGGXG--GGXRGG 671
R G R GGR G GG R GR G G GG +GG
Sbjct: 32 RGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 29.1 bits (62), Expect = 0.84
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -2
Query: 852 GRXXGGXGGDGEXXVGGXGQGXXAXGXAXGEGAGXGAXRXPXXGGGGREGXEG 694
G GG GG G G G G G G G GA GGR G +G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRG--GARGGRGGRGGARGGRGGSSGGRGGAKG 69
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.1 bits (62), Expect = 0.84
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Frame = +2
Query: 572 PPPTXXAXXXXPXAXXVSP-APHYPLRXXPLXAPSAXXPPXXPSXP---SRPPPPXXGXR 739
PPP A P S A Y + +PSA P P P SR PP
Sbjct: 1010 PPPKQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRLPPVSATRP 1069
Query: 740 XAPXPAPSPXAXP 778
P P P A P
Sbjct: 1070 QIPQPPPVSTALP 1082
Score = 26.6 bits (56), Expect = 4.5
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Frame = +2
Query: 527 APLSXPXPPXXXGXT-PPPTXXAXXXXPXAXXVSPAPHYPLR-XXPLXAPS--AXXPPXX 694
AP PP G T PPT P P P+ P+ P+ A S + P
Sbjct: 920 APAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMP 979
Query: 695 PSXPSRP 715
PS P P
Sbjct: 980 PSNPYTP 986
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 645 SDXGLXXXPPPRXPPPXPPXLPVLXPPXG--VXXLPPSLPP 761
+D G PPP P LP PP LPP+ PP
Sbjct: 1870 NDDGSDLSNQAAPPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +2
Query: 656 PLXAPSAXXPPXXPSXPSRPPPPXXGXRXAPXPAPSP 766
P P+ P P+ PPPP +P P+P
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 674 AXXPPXXPSXPSRPPPPXXGXRXAPXPAPSP 766
A PP P P PPPP P P P P
Sbjct: 2 ASLPPGNPPPP--PPPPGFEPPSQPPPPPPP 30
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 632 PHYPLRXXPLXAPSAXXPPXXPS--XPSRPPPPXXGXRXAP 748
PH P+ P +P++ PP P+ PS PP AP
Sbjct: 200 PH-PIHNHPYSSPTSYPPPLCPATYCPSNPPQLAPATAIAP 239
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +2
Query: 623 SPAPHYPLRXXPLXAP----SAXXPPXXPSXPSRPPPPXXGXRXAPXPAPSPXAXPXA 784
SP+P + AP S P PS P+RP PP + + AP A P A
Sbjct: 331 SPSPAFTANRFSPAAPTTVSSERNAPPYPSAPTRPTPPT--VQTSSSAAPVDSAEPVA 386
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 7.8
Identities = 22/65 (33%), Positives = 25/65 (38%)
Frame = +2
Query: 530 PLSXPXPPXXXGXTPPPTXXAXXXXPXAXXVSPAPHYPLRXXPLXAPSAXXPPXXPSXPS 709
PL P PP PPPT P + S P P R PP P+ PS
Sbjct: 234 PLPAPPPP------PPPTLP-----PQSTNTSQLP-MPSRNVNNLGSQVNIPPP-PATPS 280
Query: 710 RPPPP 724
+PP P
Sbjct: 281 QPPRP 285
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,704,022
Number of Sequences: 5004
Number of extensions: 21657
Number of successful extensions: 312
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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