Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_E11
(768 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064377-1|AAH64377.1| 191|Homo sapiens TNFRSF12A protein protein. 34 0.64
X05825-1|CAA29265.1| 536|Homo sapiens CSF-4 protein. 31 6.0
U22386-1|AAA64849.1| 438|Homo sapiens macrophage-colony stimula... 31 6.0
M64592-1|AAA59572.1| 554|Homo sapiens macrophage colony-stimula... 31 6.0
M37435-1|AAA52117.1| 554|Homo sapiens CSF1 protein. 31 6.0
M27087-1|AAA59573.1| 553|Homo sapiens macrophage colony-stimula... 31 6.0
BC021117-1|AAH21117.1| 554|Homo sapiens colony stimulating fact... 31 6.0
AL450468-2|CAH71146.1| 554|Homo sapiens colony stimulating fact... 31 6.0
AL450468-1|CAH71147.1| 438|Homo sapiens colony stimulating fact... 31 6.0
AB208952-1|BAD92189.1| 515|Homo sapiens colony stimulating fact... 31 6.0
>BC064377-1|AAH64377.1| 191|Homo sapiens TNFRSF12A protein protein.
Length = 191
Score = 33.9 bits (74), Expect = 0.64
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = -2
Query: 428 ARCPRSYERATGWQCIASRPGRLVLVQRGIP--GHQRHCLGGLTGCRTETADVSEPS-IR 258
A C S +GW+C A PG V RG P G+ LG TGC +A++ E + +
Sbjct: 15 AGCCGSSCWGSGWRCCAPWPGSKRQV-RGTPGSGNPGPGLGSRTGCLENSAELGEQADVG 73
Query: 257 LEGSVGWASLG*AAPSGCSVDRGSP 183
+ G V + L AP GC SP
Sbjct: 74 IWGQVAFKQL---AP-GCGKFHHSP 94
>X05825-1|CAA29265.1| 536|Homo sapiens CSF-4 protein.
Length = 536
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 219 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 383
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 258 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 316
Query: 384 TLP 392
T P
Sbjct: 317 TEP 319
>U22386-1|AAA64849.1| 438|Homo sapiens macrophage-colony
stimulating factor gamma precursor protein.
Length = 438
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 219 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 383
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 384 TLP 392
T P
Sbjct: 335 TEP 337
>M64592-1|AAA59572.1| 554|Homo sapiens macrophage
colony-stimulating factor protein.
Length = 554
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 219 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 383
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 384 TLP 392
T P
Sbjct: 335 TEP 337
>M37435-1|AAA52117.1| 554|Homo sapiens CSF1 protein.
Length = 554
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 219 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 383
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 384 TLP 392
T P
Sbjct: 335 TEP 337
>M27087-1|AAA59573.1| 553|Homo sapiens macrophage
colony-stimulating factor protein.
Length = 553
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 219 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 383
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 384 TLP 392
T P
Sbjct: 335 TEP 337
>BC021117-1|AAH21117.1| 554|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 554
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 219 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 383
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 384 TLP 392
T P
Sbjct: 335 TEP 337
>AL450468-2|CAH71146.1| 554|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 554
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 219 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 383
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 384 TLP 392
T P
Sbjct: 335 TEP 337
>AL450468-1|CAH71147.1| 438|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 438
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 219 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 383
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 384 TLP 392
T P
Sbjct: 335 TEP 337
>AB208952-1|BAD92189.1| 515|Homo sapiens colony stimulating factor
1 isoform a precursor variant protein.
Length = 515
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 219 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 383
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 330 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 388
Query: 384 TLP 392
T P
Sbjct: 389 TEP 391
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,928,440
Number of Sequences: 237096
Number of extensions: 2071595
Number of successful extensions: 7443
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7422
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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