Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_E11
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2257|AAS65359.1|  332|Drosophila melanogaster CG33250-P...    31   2.3  
AE014297-542|AAF54076.2|  428|Drosophila melanogaster CG1988-PA,...    30   3.0  
AE014297-541|AAO41513.1|  578|Drosophila melanogaster CG1988-PB,...    30   3.0  
BT003637-1|AAO39641.1|  525|Drosophila melanogaster AT18606p pro...    29   7.0  
AE014134-1160|AAF52434.2|  492|Drosophila melanogaster CG11322-P...    29   7.0  

>AE014298-2257|AAS65359.1|  332|Drosophila melanogaster CG33250-PA
           protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +2

Query: 65  RAGYVRLNDLQVLRADRGPKDFRTHPLNDSPALLHPTR*GGYRGQHY--NQTARLTPRTP 238
           R     +  LQ +   + PKD+RT+ L + P ++        RG+ Y   +  R  PRTP
Sbjct: 44  RLSISNVESLQTMPGVKSPKDWRTYTLTNHPGIIVIRNPFSERGRRYWSARCLRDFPRTP 103

Query: 239 S 241
           +
Sbjct: 104 N 104


>AE014297-542|AAF54076.2|  428|Drosophila melanogaster CG1988-PA,
           isoform A protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = -3

Query: 565 PSPPSRGSEKGLCPTPGPL*MAASPPVKVKGRPEG 461
           PSPP     K   P+P P   A   P K K  PEG
Sbjct: 337 PSPPPAQPPKAANPSPPPSKAAPPSPPKPKANPEG 371


>AE014297-541|AAO41513.1|  578|Drosophila melanogaster CG1988-PB,
           isoform B protein.
          Length = 578

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = -3

Query: 565 PSPPSRGSEKGLCPTPGPL*MAASPPVKVKGRPEG 461
           PSPP     K   P+P P   A   P K K  PEG
Sbjct: 487 PSPPPAQPPKAANPSPPPSKAAPPSPPKPKANPEG 521


>BT003637-1|AAO39641.1|  525|Drosophila melanogaster AT18606p
           protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 174 VGCKSAGESFSGWVLKSLGPRSALNTCRSLSLTY 73
           V C      F G+V +SL P  +LN C  L+LTY
Sbjct: 279 VPCLERHPKFYGFV-RSLSPSISLNMCHPLALTY 311


>AE014134-1160|AAF52434.2|  492|Drosophila melanogaster CG11322-PA
           protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 174 VGCKSAGESFSGWVLKSLGPRSALNTCRSLSLTY 73
           V C      F G+V +SL P  +LN C  L+LTY
Sbjct: 246 VPCLERHPKFYGFV-RSLSPSISLNMCHPLALTY 278


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,814,816
Number of Sequences: 53049
Number of extensions: 572317
Number of successful extensions: 2248
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2248
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)