Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_E10
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0153 - 1172080-1172450,1172493-1172592,1173777-1174691           29   6.2  
11_01_0156 - 1290361-1290876,1291095-1291201,1292027-1292105,129...    29   6.2  

>12_01_0153 - 1172080-1172450,1172493-1172592,1173777-1174691
          Length = 461

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -3

Query: 718 WSQXTVXGGPGVHWTDVGKXXAXPMVPGXLSXRRA 614
           WS  T        W DVG   A P  PG L+ + +
Sbjct: 113 WSPPTDGAADAAMWPDVGSGAAAPRYPGGLNQQHS 147


>11_01_0156 -
           1290361-1290876,1291095-1291201,1292027-1292105,
           1292609-1293523
          Length = 538

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -3

Query: 718 WSQXTVXGGPGVHWTDVGKXXAXPMVPGXLSXRRA 614
           WS  T        W DVG   A P  PG L+ + +
Sbjct: 113 WSPPTDGAADAAMWPDVGSGAAAPRYPGGLNQQHS 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,501,191
Number of Sequences: 37544
Number of extensions: 263566
Number of successful extensions: 802
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)