Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_E09
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672...    29   3.2  
08_01_0125 + 1001397-1001865,1002743-1002810,1003359-1003490,100...    29   3.2  
03_01_0251 - 1956985-1957058,1957238-1957361,1957646-1957744,195...    29   5.6  
01_04_0008 + 15041682-15041909,15042035-15042319,15042406-150427...    29   5.6  
07_03_1614 + 28152812-28153204,28153301-28153585,28153676-281539...    28   7.4  
01_06_0475 + 29610268-29610711                                         28   7.4  

>09_06_0351 +
           22466160-22466217,22466514-22467052,22467186-22467293,
           22467391-22467546,22467916-22468131,22468639-22468776,
           22468880-22468981,22469089-22469146,22469346-22469408,
           22469543-22469640
          Length = 511

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -2

Query: 465 ISKYLQSASMRHFDKAARHANPLIVAAGNYIPDPADRMESSRRRPK-HVISDP 310
           +S Y +S SM  F  +AR   P++ ++ NY+          RRR +  + SDP
Sbjct: 53  VSNYSRSTSMERFQLSARFHQPVVDSSTNYLTRWFYNANLKRRRIECFLTSDP 105


>08_01_0125 +
           1001397-1001865,1002743-1002810,1003359-1003490,
           1003649-1003810,1003973-1004260
          Length = 372

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = -1

Query: 304 STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGG 146
           S NG       R P SS  +L  +G    L+L  S   F P   SG+R RSGG
Sbjct: 200 SANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGS---FMPTENSGTRSRSGG 249


>03_01_0251 -
           1956985-1957058,1957238-1957361,1957646-1957744,
           1957821-1957919,1958097-1958195,1958306-1958404,
           1958744-1958820,1959232-1959952
          Length = 463

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 777 SPXDSRMTFPPPHQDGTRSXPLHPRTSL 694
           SP   R+  PPP + G R  P +PR  L
Sbjct: 184 SPVPDRVEAPPPPEPGARVAPRNPRLGL 211


>01_04_0008 +
           15041682-15041909,15042035-15042319,15042406-15042723,
           15044087-15044128,15045111-15045391,15045808-15045883,
           15046196-15046296,15047971-15048088,15048872-15049186
          Length = 587

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 753 FPPPHQDGTRSXPL 712
           FPPPHQDG    PL
Sbjct: 501 FPPPHQDGAMGNPL 514


>07_03_1614 +
           28152812-28153204,28153301-28153585,28153676-28153993,
           28154657-28154884,28155390-28155490,28156204-28156321,
           28156445-28156726
          Length = 574

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 753 FPPPHQDGTRSXPL 712
           FPPPHQDG    PL
Sbjct: 498 FPPPHQDGALGYPL 511


>01_06_0475 + 29610268-29610711
          Length = 147

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -1

Query: 268 SPFSSNPSLATKGSTSKLTLRHSPLSFSPD 179
           SP SS+P      S+++ TL HSP S SPD
Sbjct: 54  SPMSSSPP---SRSSTRATLTHSPSSASPD 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,869,357
Number of Sequences: 37544
Number of extensions: 403854
Number of successful extensions: 1094
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)