Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_E07
         (792 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1408 - 26353389-26355191                                        179   3e-45
03_03_0094 + 14378953-14380728                                        177   1e-44
05_06_0212 + 26410330-26410419,26410562-26410846,26411005-264112...    30   2.4  
12_01_0400 + 3169597-3170504,3170510-3171269                           29   3.2  
04_04_1107 - 30954647-30954769,30955052-30955141,30955309-309556...    28   7.4  

>07_03_1408 - 26353389-26355191
          Length = 600

 Score =  179 bits (435), Expect = 3e-45
 Identities = 73/123 (59%), Positives = 105/123 (85%)
 Frame = -2

Query: 581 WSYENHKDETYXRRVIKPLEGLLXAHKRIFIKDSAVNAVXYGAKVLLPGILRYEDGIEVD 402
           W+ +N+ DETY RR++ PLE LL ++KR+ +KDSAVNA+ YGAK+++PG+LR+E+ I+V 
Sbjct: 285 WAMDNYNDETYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIDVG 344

Query: 401 QEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKK 222
           +E+V++TTKGEA+A+ +A MTT+ MA+CDHG  AK+KRV+M+RDTYPRKWGLGP A +KK
Sbjct: 345 EEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKK 404

Query: 221 ILI 213
            ++
Sbjct: 405 KMV 407



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 229 RKKSSYXQGKLDKYGKPNENTPKEWLNS 146
           +KK    +G LDK+GKPNE TP EW+ +
Sbjct: 402 KKKKMVAEGLLDKHGKPNEKTPAEWIRN 429


>03_03_0094 + 14378953-14380728
          Length = 591

 Score =  177 bits (430), Expect = 1e-44
 Identities = 73/123 (59%), Positives = 104/123 (84%)
 Frame = -2

Query: 581 WSYENHKDETYXRRVIKPLEGLLXAHKRIFIKDSAVNAVXYGAKVLLPGILRYEDGIEVD 402
           W+ +N  DE+Y RR++ PLE LL ++KR+ +KDSAVNA+ YGAK+++PG+LR+E+ IEV 
Sbjct: 289 WAMDNFNDESYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENEIEVG 348

Query: 401 QEIVIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKK 222
           +E+V++TTKGEA+A+ +A MTT+ MA+CDHG  AK+KRV+M+RDTYPRKWGLGP A +KK
Sbjct: 349 EEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKK 408

Query: 221 ILI 213
            ++
Sbjct: 409 KMV 411



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = -3

Query: 229 RKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEG--SRKRTASTANA 56
           +KK    +G LDK+GKPNE TP EWL + V       P  GD +  G  +          
Sbjct: 406 KKKKMVAEGLLDKHGKPNEKTPSEWLRNAV------LPAGGDAMIAGIAAAPEPEKPKVK 459

Query: 55  EDPDVSIEVKQE 20
           E+ DV+ E K++
Sbjct: 460 EEADVAEETKEK 471


>05_06_0212 +
           26410330-26410419,26410562-26410846,26411005-26411208,
           26411636-26411692,26411859-26412926
          Length = 567

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = -3

Query: 280 WNETRTPENG-VSDRKPHRKKSSY----XQGKLDKYGKPNENTPKEWLNSYVNYNVKKEP 116
           W     P+   V+D KPH +K+SY      GKL +  + +   P E   + +    +K  
Sbjct: 248 WRPISHPKRAAVTDAKPHTRKASYAMETESGKLKRNSRRSSAAPVESSQTNIAMETEKSR 307

Query: 115 ENGDGVEEGSRKRTASTANA 56
            N        RK T+STA++
Sbjct: 308 RN-------PRKFTSSTADS 320


>12_01_0400 + 3169597-3170504,3170510-3171269
          Length = 555

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 229 CEAFGPRPHFLGYVSRSIMTRLSFAATP 312
           CEA  P  H   Y +R +  R+S AATP
Sbjct: 212 CEATSPVDHLAYYFARGLKLRISGAATP 239


>04_04_1107 -
           30954647-30954769,30955052-30955141,30955309-30955617,
           30955732-30955842,30955945-30956379,30956452-30956610,
           30957044-30957994,30959016-30959483
          Length = 881

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = -3

Query: 277 NETRTPENGVSDRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPE---NG 107
           +E +  + G +   P RK+SS   G+  +  K   ++P E L    +  + K+PE   N 
Sbjct: 309 SELKKAQAGKTIGCPKRKRSSKNAGENKRKNKGFPSSPNEGLYLRRSKRLTKQPEQPIND 368

Query: 106 DGVEEGSRKRTASTANAEDPDV 41
           D V++ +   + +  N++ PD+
Sbjct: 369 DPVQQPA--ASPNQYNSDPPDI 388


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,455,079
Number of Sequences: 37544
Number of extensions: 316083
Number of successful extensions: 899
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)