Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_E07
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...   173   1e-43
U21323-7|AAA62551.1|  465|Caenorhabditis elegans Hypothetical pr...    31   0.71 
Z82274-8|CAB05230.3|  467|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U23517-9|AAB93334.2|  314|Caenorhabditis elegans Ubiquitin conju...    30   1.7  
Z93385-5|CAB07639.1|  734|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z93385-4|CAB07640.1|  806|Caenorhabditis elegans Hypothetical pr...    29   3.8  
X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomera...    29   3.8  
U80838-6|AAC71115.1|  169|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U80028-10|AAN73868.2|  376|Caenorhabditis elegans Serpentine rec...    28   6.7  
Z80789-1|CAB02551.1|  708|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z47808-7|CAA87771.2|  934|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U41553-5|AAO91694.1|  468|Caenorhabditis elegans Hypothetical pr...    28   8.8  
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    28   8.8  

>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score =  173 bits (421), Expect = 1e-43
 Identities = 76/121 (62%), Positives = 99/121 (81%)
 Frame = -2

Query: 572 ENHKDETYXRRVIKPLEGLLXAHKRIFIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEI 393
           +  KDE+Y R +++PLE LL  HKR+ +KDS +NA+ YGAK+L+PGILRY+D IEV +EI
Sbjct: 262 DTQKDESYMRHIVRPLEALLTQHKRVVVKDSCINAICYGAKILIPGILRYDDDIEVGKEI 321

Query: 392 VIVTTKGEAVALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILI 213
           VI++TKGEA+ +A+A M TST+AS DHGV AK KRVIMERD Y RKWGLGP AS+KK ++
Sbjct: 322 VIMSTKGEAICIAIAQMNTSTIASVDHGVVAKSKRVIMERDVYGRKWGLGPVASKKKQMV 381

Query: 212 Q 210
           +
Sbjct: 382 K 382



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = -3

Query: 229 RKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYN----VKKEPENGDGVEEGSRKRTASTA 62
           +KK     G LDK+GKPN+ TPK W   YV  +    VKKE    +  EE  +K++  + 
Sbjct: 376 KKKQMVKDGLLDKFGKPNDTTPKSWAKEYVQTSTKKEVKKEETPDEEEEEAPKKKSKKSK 435

Query: 61  NAEDPD 44
             E  D
Sbjct: 436 KQESSD 441


>U21323-7|AAA62551.1|  465|Caenorhabditis elegans Hypothetical
           protein C45G9.8 protein.
          Length = 465

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 19/83 (22%), Positives = 37/83 (44%)
 Frame = -1

Query: 300 ETQACHNGTRHVPQKMGSRTESLTEKNPHTXKGNLTNMANQMRTHQKNG*TVTSTIMLRK 121
           E       T  +P    + ++S TEK   T    +T      +T +++  TVT+T +   
Sbjct: 90  ECATMSTSTHVMPNSSSTISKSATEKKTKTGSKKVTRSKKSKKTKRRSSTTVTTTTI--S 147

Query: 120 NRRMVTVSRKAAESERQAQLTQK 52
           N + VT  +     +++ Q T++
Sbjct: 148 NSKPVTPDKDKDSKDQRKQRTKR 170


>Z82274-8|CAB05230.3|  467|Caenorhabditis elegans Hypothetical
           protein JC8.2 protein.
          Length = 467

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 24/86 (27%), Positives = 44/86 (51%)
 Frame = -3

Query: 277 NETRTPENGVSDRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGV 98
           NET   ++  SD +  + K    +G ++   + +E   K+++  Y N N+K EPE  DG+
Sbjct: 46  NETELDDDEESDNE--KLKGLRGRGDVEMKDEESE-FEKKYMKGY-NENIKDEPEGQDGM 101

Query: 97  EEGSRKRTASTANAEDPDVSIEVKQE 20
           +  +   T    N +DP V+ +V  +
Sbjct: 102 KGIAMYST----NKDDPYVTEQVDSD 123


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/85 (22%), Positives = 35/85 (41%)
 Frame = -3

Query: 274 ETRTPENGVSDRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVE 95
           E   PEN   D + H+K+       ++   + +E++ K   +     N K   +  DG E
Sbjct: 729 EDEEPENHDEDVEDHKKEKESQSSTINTADEDDESSKKMKKHKKSKKNKKHHRKEEDGDE 788

Query: 94  EGSRKRTASTANAEDPDVSIEVKQE 20
           +  RKR     + ++     E + E
Sbjct: 789 DEERKRKKHKKHKKEKKSKKEKRDE 813


>U23517-9|AAB93334.2|  314|Caenorhabditis elegans Ubiquitin
           conjugating enzyme protein6 protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 181 PNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRKRTASTANAEDPDVS 38
           P E  P E  +S    NV++  E+ D  EEG+   T +  ++E PDV+
Sbjct: 203 PTETEPSEETSSVPTENVEESEEDADEREEGT---TVNVNSSEVPDVA 247


>Z93385-5|CAB07639.1|  734|Caenorhabditis elegans Hypothetical
           protein M01E5.5b protein.
          Length = 734

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -3

Query: 244 DRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGS 86
           D KP ++KSS   GK    G  +E+  K         N KK  E+ +  +E S
Sbjct: 69  DYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEES 121


>Z93385-4|CAB07640.1|  806|Caenorhabditis elegans Hypothetical
           protein M01E5.5a protein.
          Length = 806

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -3

Query: 244 DRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGS 86
           D KP ++KSS   GK    G  +E+  K         N KK  E+ +  +E S
Sbjct: 69  DYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEES 121


>X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomerase
           protein.
          Length = 806

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -3

Query: 244 DRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGS 86
           D KP ++KSS   GK    G  +E+  K         N KK  E+ +  +E S
Sbjct: 69  DYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEES 121


>U80838-6|AAC71115.1|  169|Caenorhabditis elegans Hypothetical
           protein F47F6.4 protein.
          Length = 169

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 119 FFLNIIVDVTV*PFFWCVLIWFAIFVKF 202
           F  N  ++  V PF W V  WFA  V++
Sbjct: 108 FSANFNIEFKVLPFMWTVCYWFAPLVEY 135


>U80028-10|AAN73868.2|  376|Caenorhabditis elegans Serpentine
           receptor, class w protein139 protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 147 VTSTIMLRKNRRMVTVSRKAAESERQAQL 61
           VT  +++ KNRR ++ S+ +AES R   L
Sbjct: 246 VTQLLLVNKNRRSISSSKSSAESLRTTHL 274


>Z80789-1|CAB02551.1|  708|Caenorhabditis elegans Hypothetical
           protein F48C11.2 protein.
          Length = 708

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -3

Query: 187 GKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRKRTAS---TANAEDPDVS 38
           GKPN  TPK    S +    + E ENG  +    R+R AS     N + P++S
Sbjct: 536 GKPNNGTPKRMTFSPI--ADESEEENGARIPSPPRERRASGGRPGNNDGPNLS 586


>Z47808-7|CAA87771.2|  934|Caenorhabditis elegans Hypothetical
           protein D2013.5 protein.
          Length = 934

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 220 SSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGD 104
           S   +G  D +G   +N   EW+  +  +  +KE +NG+
Sbjct: 129 SQKMKGIKDGFGADGQNKWAEWMAKFEQFKQQKEDQNGN 167


>U41553-5|AAO91694.1|  468|Caenorhabditis elegans Hypothetical
           protein ZK1193.5a protein.
          Length = 468

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = -3

Query: 292 SVS*WNET-RTPENGVSDRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVN 137
           +V+ W +T  T E+  S  +  R  + Y   +LDK+ K + N  K+ +N+Y++
Sbjct: 162 AVNEWLDTLETNEDRRSPTQVQRFNTLYEIPRLDKWFKSDANPSKQKMNNYLS 214


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 767 WGVFGXXXGGWXXNXGXXGGXLG 699
           WG  G   GGW  N G  GG  G
Sbjct: 115 WGGGGNNDGGWGGNNGGGGGGRG 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,504,354
Number of Sequences: 27780
Number of extensions: 273003
Number of successful extensions: 852
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)