Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_E06
         (771 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    34   0.13 
AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    32   0.52 
Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical pr...    31   0.91 
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z75537-2|CAA99835.1|  622|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -2

Query: 692 VTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 576
           + LYKT IRP + Y +VV +   ++   T++S+Q+ F R
Sbjct: 221 ILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259


>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -2

Query: 692 VTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 576
           + LYKT IRP + Y +VV +   ++    ++S+Q+ F R
Sbjct: 191 ILLYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229


>Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical
           protein F40F8.5 protein.
          Length = 420

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 416 PNPDHAGASHRRRPRHVLTDPSD 348
           PN DH G +H RR R+   DPSD
Sbjct: 242 PNVDHIGHNHHRRKRNHDDDPSD 264



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 416 PNPDHAGASHRRRPRHVLTDPSD 348
           PN DH G +HRR+  H   DPSD
Sbjct: 198 PNVDHTGHNHRRKRNHD-DDPSD 219



 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -2

Query: 416 PNPDHAGASHRRRPRHVLTDPSD 348
           PN DH G +HRRR R    DPSD
Sbjct: 287 PNVDHTGHNHRRR-RDQDDDPSD 308


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +2

Query: 65  GQVGEQRLSQEGWDLLTATRAPPKET*QLKSSCFANESTTGSESRPAEKIRRETQRADSW 244
           G+VGE++ S++  D++  + AP  E  + +     NE     E    EK+  E ++A + 
Sbjct: 164 GEVGEKKESEQPTDMVEPSSAPTTEETETE-----NEEEDDKEKTDKEKLDAEKEKALAE 218

Query: 245 VRLHGE 262
            RL  E
Sbjct: 219 KRLERE 224


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +2

Query: 65  GQVGEQRLSQEGWDLLTATRAPPKET*QLKSSCFANESTTGSESRPAEKIRRETQRADSW 244
           G+VGE++ S++  D++  + AP  E  + +     NE     E    EK+  E ++A + 
Sbjct: 164 GEVGEKKESEQPTDMVEPSSAPTTEETETE-----NEEEDDKEKTDKEKLDAEKEKALAE 218

Query: 245 VRLHGE 262
            RL  E
Sbjct: 219 KRLERE 224


>Z75537-2|CAA99835.1|  622|Caenorhabditis elegans Hypothetical
           protein F18E2.2 protein.
          Length = 622

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = -2

Query: 635 AHAARTHIDTLQSLQ-SR--FCRLAVGAPWFVRNVDLHDDLDLESIQKYMKSASERYFDK 465
           AHA    I  L   Q SR   C LA+G P  +   +  ++LD+ESI    ++  +     
Sbjct: 512 AHAHTVKIKDLSGGQKSRVALCNLALGGPDIIILDEPTNNLDIESIDALAEAIRDFNGGV 571

Query: 464 AM-RHDNRLIV 435
            M  HD RL+V
Sbjct: 572 VMVTHDERLVV 582


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,018,739
Number of Sequences: 27780
Number of extensions: 276600
Number of successful extensions: 837
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)