Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_E04
         (766 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||...    29   0.55 
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo...    29   0.96 
SPBC2G2.10c |mug110||sequence orphan|Schizosaccharomyces pombe|c...    28   1.7  
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|...    27   3.9  
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces...    26   5.1  
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |...    26   6.8  
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo...    26   6.8  
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch...    25   9.0  
SPAC644.17c |mrpl9||mitochondrial ribosomal protein subunit L9|S...    25   9.0  
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha...    25   9.0  
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2...    25   9.0  
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1...    25   9.0  

>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 3971

 Score = 29.5 bits (63), Expect = 0.55
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +3

Query: 387  PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASP-DTNA 563
            P T+ T +   PP+          P  ++    TST  T  T +    P T+++  +T+ 
Sbjct: 1643 PITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTST 1702

Query: 564  P 566
            P
Sbjct: 1703 P 1703



 Score = 26.2 bits (55), Expect = 5.1
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
 Frame = +3

Query: 372 PQQILPATTQTTILRVP-PLLHDVTPTLRKPT--------ANTCQARTSTHFTGKTCIRQ 524
           P   L  ++ TTI     P  + +     KPT        ANT    TST  T  T +  
Sbjct: 321 PSVALSTSSTTTITNASTPAANTIISRSSKPTDTTNSISFANTTPENTSTQITSPTAVNS 380

Query: 525 RNPNTAAS 548
             P T++S
Sbjct: 381 STPITSSS 388


>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
           Pik3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 801

 Score = 28.7 bits (61), Expect = 0.96
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 509 NLHPPAEPEHRRIARHERTGRL 574
           NL  PAE +HRR+ R +R G L
Sbjct: 235 NLDSPAELKHRRLVRSQRNGPL 256


>SPBC2G2.10c |mug110||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 248

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 317 PSATCADSQDILPPCKLLTATNLTSHHANYNFTGST 424
           PSA+ + S  + PP ++L+  ++TS HA  N    T
Sbjct: 213 PSASASISDSLPPPYQVLSVPSVTSTHAFSNNANQT 248


>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 194

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +2

Query: 371 TATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIA 550
           T T   S    ++ + S S +    H  +  +E   S H+H  HR++     EP    ++
Sbjct: 110 TNTEKDSRSIAHSTSRSRSTSPANRHRRK-EKERTRSNHRHGSHRRH-----EPYRTHLS 163

Query: 551 RHER 562
           RH R
Sbjct: 164 RHHR 167


>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 3699

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 355  TMQTSYRNKSYQPPRKLQFYGFHLSYTMLLPH*GSQPRTLVKHAQART 498
            TM  + ++K     RKL+    HL +  L+ H   QP    +HAQ RT
Sbjct: 1356 TMLKTSQSKDSSSLRKLRATCLHLLFASLVAHKFDQP----QHAQTRT 1399


>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 652

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 9/24 (37%), Positives = 20/24 (83%)
 Frame = -2

Query: 708 STQFNTNNTTRSMTSGSSKQANKK 637
           ST++++NN  +S++SGS+ + +K+
Sbjct: 617 STEWSSNNERQSLSSGSNDEEDKE 640


>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
           domain|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1811

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 455 EANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVTTTSD 601
           E N ++L +  K      +L PP +    R    E+TG L  Q T+TS+
Sbjct: 60  EINDKNLEA-EKDIESNLSLRPPEDDLDSRSIESEQTGTLSKQTTSTSE 107


>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 356

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 654 KQANKKASKFPRGRKIDTSEVVVTCKIRRPVRS 556
           K  N+ + +FP   KI       TCK  +P RS
Sbjct: 139 KNWNEASRRFPYDYKIFFPNKCSTCKFEKPARS 171


>SPAC644.17c |mrpl9||mitochondrial ribosomal protein subunit
           L9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 259

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 342 KTFYHHANFLPQQIL 386
           +TF HHAN  P++IL
Sbjct: 13  RTFAHHANLTPRKIL 27


>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
           Wis1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 605

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 444 PTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNA 563
           P L +PT+   Q R      GK  +   NP +  SP + A
Sbjct: 219 PLLNRPTSFNRQTRIRRAPPGKLDLSNSNPTSPVSPSSMA 258


>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 244

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = +3

Query: 357 HANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPT--ANT 473
           H N     + P T   T   VPP  H  T T+  PT  ANT
Sbjct: 114 HVNSTTTVVPPTTHVNTTTVVPPTTHVNTTTVVPPTTHANT 154


>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1841

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 708  STQFNTNNTTRSMTSGSSKQANKKASKFPRG 616
            +++ N    T S  + +SK AN+K + FPRG
Sbjct: 1626 ASKVNLLTPTISNGTRASKHANEKENTFPRG 1656


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,997,693
Number of Sequences: 5004
Number of extensions: 58230
Number of successful extensions: 208
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)