Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_E04
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 32 0.58
10_08_0793 - 20614583-20614897,20615417-20615660,20617713-206178... 31 0.76
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 30 2.3
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 30 2.3
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 29 3.1
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 29 3.1
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142 29 4.1
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 29 4.1
08_02_0707 - 20212190-20214592 29 5.4
03_01_0404 + 3138624-3140096 29 5.4
09_06_0239 - 21794691-21795986 28 9.4
09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519... 28 9.4
06_03_0913 + 25913231-25913609,25913702-25913775,25914400-259145... 28 9.4
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 28 9.4
02_01_0624 - 4681834-4682298,4684250-4684398,4684479-4684557,468... 28 9.4
01_02_0098 - 11087875-11089110,11091744-11092022 28 9.4
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 449 TEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGR 571
+ E EH SS +H HR + H + EHR RH+R R
Sbjct: 778 SSEDEHEHRSSKSRHR-HRDDYHYHEDDEHRSSHRHQRDHR 817
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 389 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRR 544
S NY+ S +R H E +R H S HKH L R + EP H R
Sbjct: 725 SDEENYDSEESYKHSR-KKHRSEDSRAHTSDVHKHKLKRHS--KDLEPRHHR 773
>10_08_0793 -
20614583-20614897,20615417-20615660,20617713-20617899,
20618508-20618547,20618699-20618775,20618965-20619091
Length = 329
Score = 31.5 bits (68), Expect = 0.76
Identities = 27/86 (31%), Positives = 35/86 (40%)
Frame = +2
Query: 362 KLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHR 541
++ T L HH N RC+S ++ A L H H ++ L P E E R
Sbjct: 98 QIWTDMQLQDHHHECN----GPYCRCHSSSKHAKGSLLLLHHHH--QQQQLQRPNEMETR 151
Query: 542 RIARHERTGRLILQVTTTSDVSIFLP 619
R +TG L Q DVS LP
Sbjct: 152 RAEASTQTGFLRSQGICERDVSSGLP 177
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 29.9 bits (64), Expect = 2.3
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Frame = -2
Query: 333 AQVAEGETSAVAAHPVRENRADR---LD-----GTEAGRRVRQTTRSRLQHGLPILEPPR 178
A ++E T AV PV N A R LD G R + + + + + +GL + PP
Sbjct: 81 AYLSEPVTDAVITVPVYFNNAQREATLDAAAIAGLNVMRIINEPSAAAIAYGLDKMPPPA 140
Query: 177 SGCTCARVRRLVGDCAVAGPTRDVNV 100
SG A L+ D + G T DV++
Sbjct: 141 SGADAAGRTVLIFD--LGGGTLDVSL 164
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 576 IRRPVRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRLASSV 448
+R R A R C GSAG R R SA V+ + RL + V
Sbjct: 31 LRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRLDAEV 73
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 696 NTNNTTRSMTSGSSKQANKKASKFPRG 616
NTN+ +S+ +GSS QA + A+ P+G
Sbjct: 232 NTNDQVQSVPNGSSNQATRIATPLPQG 258
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 122 PATAQSPTRRRTLAQVQPERGGSNIGSP 205
PA A SPTRRR L + P SN GSP
Sbjct: 31 PAAAPSPTRRRRL--LAPLAAASNSGSP 56
>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
Length = 534
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 339 HKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPTAN 470
H+ F +FLP +I L+VPP LH V P P A+
Sbjct: 75 HRWFAQGFHFLPARIPMDGPSGWFLKVPPPLHTVDPPGSPPPAS 118
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 287 TGWAATAEVSPSATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANR 466
TG A+++ + SA A + +LLT+ TSH + N T S SH + + R
Sbjct: 680 TGSASSSPATASAAAASKKP-----RLLTSQTTTSHTSTSNATTPRSFDTTSSHQDASFR 734
Query: 467 EHL 475
E L
Sbjct: 735 ESL 737
>08_02_0707 - 20212190-20214592
Length = 800
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 389 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 556
SHH +++ S + S TE + +E+ S H H H + H +E H++ H
Sbjct: 549 SHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHDHSE-HHQQSGDH 603
>03_01_0404 + 3138624-3140096
Length = 490
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/74 (27%), Positives = 26/74 (35%)
Frame = +2
Query: 317 PSATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHA 496
PSA A + LP LLT L H + + SL R S + L +
Sbjct: 24 PSAAAAPTAPALPVQALLTTAGLLPRHPDLSLVALNSLLRVLSRRASSPAHPLLALRLLL 83
Query: 497 LHRKNLHPPAEPEH 538
L P P+H
Sbjct: 84 LMLSPASPLPPPDH 97
>09_06_0239 - 21794691-21795986
Length = 431
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 308 EVSPSATC-ADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTE 454
+ P +C A + D+ P K T NLTS NY ++ S T Y TE
Sbjct: 115 QCQPCLSCVAQAGDMYDPNKTETYANLTSSSYNYTYS-KQSFTSGYFATE 163
>09_03_0058 +
11950668-11950701,11951068-11951106,11951586-11951982,
11952016-11952314,11953743-11956795
Length = 1273
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 16 LRLHSDLEWNIKGKPEPLIYNTLKLWNTHVDVSGWTCHSTV 138
LRLH D +W ++ K + ++ TL +T + + W H V
Sbjct: 295 LRLHRDKQWAVQDKRQ-VLQRTLTEMHTFIKHAEWWFHKDV 334
>06_03_0913 +
25913231-25913609,25913702-25913775,25914400-25914540,
25914834-25914946,25915359-25915491,25916213-25916351,
25916428-25916527,25916906-25916963,25917122-25917199,
25917278-25917376,25917657-25917735,25917826-25917974,
25918529-25918834,25918994-25919032
Length = 628
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 600 SEVVVTCKIRRPVRS--CLAMRRC 535
S++ +TCKI RPVRS C RC
Sbjct: 398 SQLCITCKIVRPVRSKHCSTCDRC 421
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 419 STSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 559
+TSL R H + + H HA H + PP H ++ RHE
Sbjct: 5 ATSLNRSIDHKQGGQQRGTPQQHLHAGHAQE-QPPGH-GHGQVQRHE 49
>02_01_0624 -
4681834-4682298,4684250-4684398,4684479-4684557,
4684827-4684925,4685004-4685081,4685231-4685288,
4685814-4685913,4686000-4686008,4686105-4686138,
4686729-4686911,4687099-4687126,4687268-4687380,
4688253-4688459,4689212-4689511
Length = 633
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 600 SEVVVTCKIRRPVRS--CLAMRRC 535
S++ +TCKI RPVRS C RC
Sbjct: 363 SQLCITCKIVRPVRSKHCSTCDRC 386
>01_02_0098 - 11087875-11089110,11091744-11092022
Length = 504
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 314 RLPRSR-PTQSARTGQIASTVRRPADGS 234
RLP+S+ P + AR Q AS RRP DG+
Sbjct: 12 RLPQSQAPRRQARGLQYASPERRPLDGA 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,514,669
Number of Sequences: 37544
Number of extensions: 468783
Number of successful extensions: 1615
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1615
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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