Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_E03
         (909 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    31   2.2  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    31   2.2  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 31/124 (25%), Positives = 35/124 (28%), Gaps = 6/124 (4%)
 Frame = +1

Query: 451 PXPXXPXPPCXXAXPXXLPPPXXXXXGXQXXXVXSXXXXXXGXTSSPXXHAXXPXXPTPX 630
           P P  P PP     P   PPP       Q            G   +P      P  PTP 
Sbjct: 107 PTPSAPAPPPPSYGPPQTPPPRPP---PQPTPSAPAPPPSYGPPQTPPPR--PPPQPTPS 161

Query: 631 SRXVA------XPP*QXXPXPPXFXRXXAXLXXSXXCRSPXXLRPRXPLPXPXXAXQXPX 792
           +   +       PP    P PP        L        P   RP+ P P P      P 
Sbjct: 162 APAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKPRPTPSRPQPPPPPPPRPQPTPG 221

Query: 793 SXPP 804
             PP
Sbjct: 222 YGPP 225


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 31/124 (25%), Positives = 35/124 (28%), Gaps = 6/124 (4%)
 Frame = +1

Query: 451 PXPXXPXPPCXXAXPXXLPPPXXXXXGXQXXXVXSXXXXXXGXTSSPXXHAXXPXXPTPX 630
           P P  P PP     P   PPP       Q            G   +P      P  PTP 
Sbjct: 107 PTPSAPAPPPPSYGPPQTPPPRPP---PQPTPSAPAPPPSYGPPQTPPPR--PPPQPTPS 161

Query: 631 SRXVA------XPP*QXXPXPPXFXRXXAXLXXSXXCRSPXXLRPRXPLPXPXXAXQXPX 792
           +   +       PP    P PP        L        P   RP+ P P P      P 
Sbjct: 162 APAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKPRPTPSRPQPPPPPPPRPQPTPG 221

Query: 793 SXPP 804
             PP
Sbjct: 222 YGPP 225


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,515,292
Number of Sequences: 53049
Number of extensions: 286532
Number of successful extensions: 801
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)