Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_D11
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 283 1e-76
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 283 1e-76
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 283 1e-76
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 283 1e-76
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 283 1e-76
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 283 1e-76
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 277 5e-75
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 277 5e-75
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 33 0.22
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 283 bits (693), Expect = 1e-76
Identities = 137/205 (66%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Frame = -3
Query: 709 REHLGETXXPVDSVFAPR*ND*LHLVS-PKGKGYKGVTSRWHTKKLPRKTHKGLRKVACI 533
REHL E VD+VFA ++ + + +G G+KGVTSRWHTKKLPRKTHKGLRKVACI
Sbjct: 198 REHL-EKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Query: 532 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 353
GAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+I
Sbjct: 255 GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTI 311
Query: 352 TPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKF 173
TPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK
Sbjct: 312 TPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKT 371
Query: 172 GHGRFQTPADKAAFMGTLKKDRIRE 98
GHGRFQT A+K AFMG LK+D + E
Sbjct: 372 GHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 767 HIMESXXNGGTIEDKVKWTQ 708
H++E NGGTIE KV W +
Sbjct: 179 HLVEIQVNGGTIEQKVDWAR 198
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 283 bits (693), Expect = 1e-76
Identities = 137/205 (66%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Frame = -3
Query: 709 REHLGETXXPVDSVFAPR*ND*LHLVS-PKGKGYKGVTSRWHTKKLPRKTHKGLRKVACI 533
REHL E VD+VFA ++ + + +G G+KGVTSRWHTKKLPRKTHKGLRKVACI
Sbjct: 198 REHL-EKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Query: 532 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 353
GAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+I
Sbjct: 255 GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTI 311
Query: 352 TPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKF 173
TPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK
Sbjct: 312 TPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKT 371
Query: 172 GHGRFQTPADKAAFMGTLKKDRIRE 98
GHGRFQT A+K AFMG LK+D + E
Sbjct: 372 GHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 767 HIMESXXNGGTIEDKVKWTQ 708
H++E NGGTIE KV W +
Sbjct: 179 HLVEIQVNGGTIEQKVDWAR 198
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 283 bits (693), Expect = 1e-76
Identities = 137/205 (66%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Frame = -3
Query: 709 REHLGETXXPVDSVFAPR*ND*LHLVS-PKGKGYKGVTSRWHTKKLPRKTHKGLRKVACI 533
REHL E VD+VFA ++ + + +G G+KGVTSRWHTKKLPRKTHKGLRKVACI
Sbjct: 100 REHL-EKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
Query: 532 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 353
GAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+I
Sbjct: 157 GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTI 213
Query: 352 TPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKF 173
TPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK
Sbjct: 214 TPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKT 273
Query: 172 GHGRFQTPADKAAFMGTLKKDRIRE 98
GHGRFQT A+K AFMG LK+D + E
Sbjct: 274 GHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 767 HIMESXXNGGTIEDKVKWTQ 708
H++E NGGTIE KV W +
Sbjct: 81 HLVEIQVNGGTIEQKVDWAR 100
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 283 bits (693), Expect = 1e-76
Identities = 137/205 (66%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Frame = -3
Query: 709 REHLGETXXPVDSVFAPR*ND*LHLVS-PKGKGYKGVTSRWHTKKLPRKTHKGLRKVACI 533
REHL E VD+VFA ++ + + +G G+KGVTSRWHTKKLPRKTHKGLRKVACI
Sbjct: 198 REHL-EKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Query: 532 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 353
GAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+I
Sbjct: 255 GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTI 311
Query: 352 TPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKF 173
TPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK
Sbjct: 312 TPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKT 371
Query: 172 GHGRFQTPADKAAFMGTLKKDRIRE 98
GHGRFQT A+K AFMG LK+D + E
Sbjct: 372 GHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 767 HIMESXXNGGTIEDKVKWTQ 708
H++E NGGTIE KV W +
Sbjct: 179 HLVEIQVNGGTIEQKVDWAR 198
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 283 bits (693), Expect = 1e-76
Identities = 137/205 (66%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Frame = -3
Query: 709 REHLGETXXPVDSVFAPR*ND*LHLVS-PKGKGYKGVTSRWHTKKLPRKTHKGLRKVACI 533
REHL E VD+VFA ++ + + +G G+KGVTSRWHTKKLPRKTHKGLRKVACI
Sbjct: 100 REHL-EKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
Query: 532 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 353
GAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+I
Sbjct: 157 GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTI 213
Query: 352 TPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKF 173
TPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK
Sbjct: 214 TPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKT 273
Query: 172 GHGRFQTPADKAAFMGTLKKDRIRE 98
GHGRFQT A+K AFMG LK+D + E
Sbjct: 274 GHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 767 HIMESXXNGGTIEDKVKWTQ 708
H++E NGGTIE KV W +
Sbjct: 81 HLVEIQVNGGTIEQKVDWAR 100
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 283 bits (693), Expect = 1e-76
Identities = 137/205 (66%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Frame = -3
Query: 709 REHLGETXXPVDSVFAPR*ND*LHLVS-PKGKGYKGVTSRWHTKKLPRKTHKGLRKVACI 533
REHL E VD+VFA ++ + + +G G+KGVTSRWHTKKLPRKTHKGLRKVACI
Sbjct: 198 REHL-EKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Query: 532 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 353
GAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+I
Sbjct: 255 GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTI 311
Query: 352 TPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKF 173
TPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK
Sbjct: 312 TPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKT 371
Query: 172 GHGRFQTPADKAAFMGTLKKDRIRE 98
GHGRFQT A+K AFMG LK+D + E
Sbjct: 372 GHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 767 HIMESXXNGGTIEDKVKWTQ 708
H++E NGGTIE KV W +
Sbjct: 179 HLVEIQVNGGTIEQKVDWAR 198
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 277 bits (680), Expect = 5e-75
Identities = 127/176 (72%), Positives = 149/176 (84%)
Frame = -3
Query: 625 KGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 446
+G G+KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 445 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 266
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 236 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 292
Query: 265 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 98
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 293 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 277 bits (680), Expect = 5e-75
Identities = 127/176 (72%), Positives = 149/176 (84%)
Frame = -3
Query: 625 KGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 446
+G G+KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 445 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 266
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 236 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 292
Query: 265 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 98
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 293 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 616 GYKGVTSRWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIY 440
G++G RW + P R+T K R++ +G+ +R+ G GY RT +I
Sbjct: 234 GFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIV 293
Query: 439 RI 434
RI
Sbjct: 294 RI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,674,418
Number of Sequences: 27780
Number of extensions: 415538
Number of successful extensions: 1039
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -