Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_D09
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 42 7e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 42 7e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 41 9e-04
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 41 9e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 40 0.002
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 40 0.002
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 40 0.002
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 39 0.004
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 39 0.005
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 38 0.011
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 37 0.014
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 37 0.014
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 37 0.014
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 37 0.019
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 36 0.025
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 36 0.025
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 36 0.033
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 35 0.058
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.10
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 34 0.10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 34 0.10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 34 0.10
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 34 0.10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 34 0.10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 34 0.10
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 33 0.24
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 33 0.24
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 33 0.31
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 33 0.31
Z98866-23|CAB11557.2| 399|Caenorhabditis elegans Hypothetical p... 32 0.41
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 32 0.41
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 32 0.54
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 31 0.72
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 30 1.7
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 30 2.2
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 30 2.2
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 30 2.2
U80442-3|AAB37665.1| 333|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 29 2.9
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 29 2.9
U58732-3|AAL02519.1| 76|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58732-2|AAB00594.2| 98|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58732-1|AAL02520.1| 96|Caenorhabditis elegans Hypothetical pr... 29 3.8
U39653-4|AAL56624.1| 649|Caenorhabditis elegans Prion-like-(q/n... 29 5.1
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z50741-6|CAA90613.3| 331|Caenorhabditis elegans Hypothetical pr... 28 6.7
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 6.7
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 28 6.7
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 28 6.7
AL032630-15|CAA21571.3| 331|Caenorhabditis elegans Hypothetical... 28 6.7
AF098503-2|AAC67407.1| 115|Caenorhabditis elegans Hypothetical ... 28 6.7
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLL-PNEADFVRYL 517
TDVAARGLD+P VD ++QY +Y+H + +L P E F+RYL
Sbjct: 371 TDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTNGSGKALLVLRPEELGFLRYL 430
Query: 516 EQKRIRLRQ 490
+ ++ L +
Sbjct: 431 KAAKVTLNE 439
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TDVAARGLD+P VD+V+ Y P+ + DYVH
Sbjct: 340 TDVAARGLDIPHVDMVINYDMPSQSKDYVH 369
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADFVRYLE 514
TDVA+RGLD+P VDLV+ + P Y+H A+ F+ + + ++ +E
Sbjct: 394 TDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVE 453
Query: 513 Q 511
Q
Sbjct: 454 Q 454
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADFVRYLE 514
TDVA+RGLD+P VDLV+ + P Y+H A+ F+ + + ++ +E
Sbjct: 394 TDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVE 453
Query: 513 Q 511
Q
Sbjct: 454 Q 454
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = -3
Query: 702 LNKTDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADFVR 523
L TDV ARGLDVP+V LV+ Y P + Y+H A+ F+ ++ +R
Sbjct: 319 LISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILR 378
Query: 522 YLEQ 511
+EQ
Sbjct: 379 DIEQ 382
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = -3
Query: 702 LNKTDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADFVR 523
L TDV ARGLDVP+V LV+ Y P + Y+H A+ F+ ++ +R
Sbjct: 319 LISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILR 378
Query: 522 YLEQ 511
+EQ
Sbjct: 379 DIEQ 382
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADFVRYLE 514
TD+ ARG+DV +V LV+ Y P++ +Y+H A+ F+ N+A ++ +E
Sbjct: 325 TDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIE 384
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADFVRYLE 514
TD+ ARG+DV +V LV+ Y P++ +Y+H A+ F+ N+A ++ +E
Sbjct: 38 TDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIE 97
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADFVRYLE 514
TD+ ARG+DV +V LV+ Y P++ +Y+H A+ F+ N+A ++ +E
Sbjct: 325 TDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIE 384
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/74 (36%), Positives = 34/74 (45%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADFVRYLE 514
TDVA RG+DV V LVL Y S DY H A+ FL P+ D Y +
Sbjct: 630 TDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPD--DTAVYFD 687
Query: 513 QKRIRLRQDDESKC 472
K++ L + S C
Sbjct: 688 LKQV-LVESPVSSC 700
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEAD-FVRYL 517
TDVA+RGLD +D V+Q PA DY+H +++ + P++ + + L
Sbjct: 379 TDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNSLLMVSPSQEEAMIGKL 438
Query: 516 EQKRIRLRQ 490
E+ I + +
Sbjct: 439 EKHSIPIEE 447
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TDVAARGLDV + V+ Y P ++ DYVH
Sbjct: 433 TDVAARGLDVDDIKFVINYDYPNNSEDYVH 462
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T VAARGLD+P V V+ Y P+ +YVH
Sbjct: 484 TAVAARGLDIPNVKHVINYDLPSDVDEYVH 513
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T VAARGLD+P V V+ Y P + +YVH
Sbjct: 455 TAVAARGLDIPNVRHVINYDLPGDSDEYVH 484
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T VAARGLD+P V V+ Y P + +YVH
Sbjct: 439 TAVAARGLDIPNVRHVINYDLPGDSDEYVH 468
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T VAARGLD+P V V+ Y P + +YVH
Sbjct: 436 TAVAARGLDIPNVRHVINYDLPGDSDEYVH 465
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEAD 532
T VAARGLDV + LV+ Y P DYVH A F+LP +
Sbjct: 609 TSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQE 662
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TDVAARGLD+ +D V+ Y P Y+H
Sbjct: 330 TDVAARGLDIQGIDHVIHYQVPKKVEIYIH 359
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TDVAARGLD+ +D V+ Y P Y+H
Sbjct: 497 TDVAARGLDIQGIDHVIHYQVPKKVEIYIH 526
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TD+A+RG+DVP + VL Y P +YVH
Sbjct: 395 TDLASRGIDVPDITHVLNYDFPMDIEEYVH 424
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 35.1 bits (77), Expect = 0.058
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = -3
Query: 735 AGQLWTFSGTR---LNKTDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXX 565
A Q+ FS + + TDV ARG+D+ +D V+Q+ P ++ +VH
Sbjct: 299 ASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCGREGN 358
Query: 564 AVMFLLPNEADFVRYLE-QKRIRL 496
A++ + + +V +L+ ++++L
Sbjct: 359 ALILIASEQLAYVNFLDNHEKVKL 382
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T VA RGLD+ VD V+ Y P + DY+H
Sbjct: 663 TAVAERGLDIKGVDHVINYDMPDNIDDYIH 692
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T VA RGLD+ VD V+ Y P + DY+H
Sbjct: 874 TAVAERGLDIKGVDHVINYDMPDNIDDYIH 903
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T VA RGLD+ VD V+ Y P + DY+H
Sbjct: 874 TAVAERGLDIKGVDHVINYDMPDNIDDYIH 903
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T VA RGLD+ VD V+ Y P + DY+H
Sbjct: 663 TAVAERGLDIKGVDHVINYDMPDNIDDYIH 692
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T VA RGLD+ VD V+ Y P + DY+H
Sbjct: 663 TAVAERGLDIKGVDHVINYDMPDNIDDYIH 692
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TDVAARG+D+P +D V+ P A +VH
Sbjct: 322 TDVAARGVDIPLLDTVINLHFPPKAKLFVH 351
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TDVAARG+D+P +D V+ P A +VH
Sbjct: 322 TDVAARGVDIPLLDTVINLHFPPKAKLFVH 351
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T VA RGLD+ VD V+ Y P + DY+H
Sbjct: 874 TAVAERGLDIKGVDHVINYDMPDNIDDYIH 903
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TD+ RG+D+ RV++V Y P + Y+H
Sbjct: 340 TDLFGRGMDIERVNIVFNYDMPEDSDSYLH 369
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TD+ RG+D+ RV++V Y P + Y+H
Sbjct: 332 TDLFGRGMDIERVNIVFNYDMPEDSDSYLH 361
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T V RGLD+ VD V+ Y P + DY+H
Sbjct: 620 TAVVERGLDIKGVDHVINYDMPNNIDDYIH 649
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T V RGLD+ VD V+ Y P + DY+H
Sbjct: 620 TAVVERGLDIKGVDHVINYDMPNNIDDYIH 649
>Z98866-23|CAB11557.2| 399|Caenorhabditis elegans Hypothetical
protein Y49E10.24 protein.
Length = 399
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 97 AIKTDLHFGEARPLPFFFVVDCKSVDGSLFLQFRIGLSSPGEGRRGVSQSE 249
+I+T++ +RP+ +C + FL +R G+S P +GRR S SE
Sbjct: 198 SIETNIDNMSSRPI---LKTECYLIQQCRFLAYRYGISGPTDGRRASSLSE 245
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
T++ RGLD+ V LV+ Y P S Y+H
Sbjct: 432 TELLGRGLDLSDVGLVINYDLPTSIVSYIH 461
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 702 LNKTDVAARGLDVPRVDLVLQYCAPASATDYVH 604
L TD+A+RGLD+ V V+ P S Y+H
Sbjct: 471 LVSTDLASRGLDIEGVQTVINMNMPKSIKQYIH 503
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.5 bits (68), Expect = 0.72
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
+DV ARG D+ +VD V+ Y PA +VH
Sbjct: 456 SDVLARGTDLNKVDCVINYNLPADDKLFVH 485
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TDVA++GLD ++ V+ + P +YVH
Sbjct: 498 TDVASKGLDFQGIEHVINFDMPEDIENYVH 527
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATD 613
T+V ARG+DV +V +V+ Y P TD
Sbjct: 512 TNVFARGIDVAQVSVVINYDLPIKYTD 538
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATD 613
T+V ARG+DV +V +V+ Y P TD
Sbjct: 537 TNVFARGIDVAQVSVVINYDLPIKYTD 563
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATD 613
T+V ARG+DV +V +V+ Y P TD
Sbjct: 921 TNVFARGIDVAQVSVVINYDLPIKYTD 947
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
+DV ARGLDV V V+ P + YVH
Sbjct: 562 SDVVARGLDVQGVPFVISVTLPDEKSMYVH 591
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/82 (23%), Positives = 39/82 (47%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADFVRYLE 514
+D+ RG+D+ V++V+ + P +A Y+H A+ + + +R +E
Sbjct: 337 SDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIE 396
Query: 513 QKRIRLRQDDESKCLEALRSVA 448
Q+ +R R + K ++ VA
Sbjct: 397 QE-LRTRIEPIPKTVDPKLYVA 417
>U80442-3|AAB37665.1| 333|Caenorhabditis elegans Hypothetical
protein T20F5.4 protein.
Length = 333
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 531 NPLRS--VRETLPQHRYAPLVRYAQPCEHNQLRMRVRSTAXRGPLEARPSHGP 683
+P RS VR LP P +AQPC+ ++ ++ P+ RPS P
Sbjct: 268 SPARSPPVRRALPIE-LKPTQHFAQPCKIRSPKLNTKTVFAAKPIAVRPSISP 319
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = -3
Query: 708 TRLNKTDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADF 529
++L+K +RG+D V V+ + P + Y+H A+ F +P+E
Sbjct: 360 SKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSER-- 417
Query: 528 VRYLEQKRIRLRQDDESKCLE 466
+LEQ + + Q K L+
Sbjct: 418 -AHLEQIQEEINQQMGRKVLQ 437
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = -3
Query: 708 TRLNKTDVAARGLDVPRVDLVLQYCAPASATDYVHXXXXXXXXXXXXXAVMFLLPNEADF 529
++L+K +RG+D V V+ + P + Y+H A+ F +P+E
Sbjct: 427 SKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSER-- 484
Query: 528 VRYLEQKRIRLRQDDESKCLE 466
+LEQ + + Q K L+
Sbjct: 485 -AHLEQIQEEINQQMGRKVLQ 504
>U58732-3|AAL02519.1| 76|Caenorhabditis elegans Hypothetical
protein F48D6.4b protein.
Length = 76
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -3
Query: 285 PKLLHLGHAA--KAFALRDTPAALARRTKSDPKLKKERPVNRLTVHDEEERKRPGFPKVK 112
PKL+ + +A F R+ ++ R ++PK+ ++P + +HDE + GFPK +
Sbjct: 4 PKLVRVAQSAVFNQFMTREAISSATFRP-AEPKMM-DQPKMNIRIHDESTHLKFGFPKTE 61
>U58732-2|AAB00594.2| 98|Caenorhabditis elegans Hypothetical
protein F48D6.4a protein.
Length = 98
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -3
Query: 285 PKLLHLGHAA--KAFALRDTPAALARRTKSDPKLKKERPVNRLTVHDEEERKRPGFPKVK 112
PKL+ + +A F R+ ++ R ++PK+ ++P + +HDE + GFPK +
Sbjct: 4 PKLVRVAQSAVFNQFMTREAISSATFRP-AEPKMM-DQPKMNIRIHDESTHLKFGFPKTE 61
>U58732-1|AAL02520.1| 96|Caenorhabditis elegans Hypothetical
protein F48D6.4c protein.
Length = 96
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -3
Query: 285 PKLLHLGHAA--KAFALRDTPAALARRTKSDPKLKKERPVNRLTVHDEEERKRPGFPKVK 112
PKL+ + +A F R+ ++ R ++PK+ ++P + +HDE + GFPK +
Sbjct: 4 PKLVRVAQSAVFNQFMTREAISSATFRP-AEPKMM-DQPKMNIRIHDESTHLKFGFPKTE 61
>U39653-4|AAL56624.1| 649|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform b protein.
Length = 649
Score = 28.7 bits (61), Expect = 5.1
Identities = 29/83 (34%), Positives = 35/83 (42%)
Frame = -3
Query: 276 LHLGHAAKAFALRDTPAALARRTKSDPKLKKERPVNRLTVHDEEERKRPGFPKVKIGFNS 97
L L AA+ ALR + KS K +RPV V + K+P K K NS
Sbjct: 560 LALARAAEQEALRKKAMEPKLKRKSRAKNSAKRPVQTDAVETVKLEKKPAQSKSK--KNS 617
Query: 96 RVMNKQSSMHTASEFDSGLPPLE 28
R + SS S S L PLE
Sbjct: 618 RSKSTPSSFANDS---SSLEPLE 637
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 693 TDVAARGLDVPRVDLVLQYCAPASATDYVH 604
TDVAARGLD+ + V+ + +VH
Sbjct: 567 TDVAARGLDISEIRTVINFDMARDIDTHVH 596
>Z50741-6|CAA90613.3| 331|Caenorhabditis elegans Hypothetical
protein Y62H9A.14 protein.
Length = 331
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Frame = -1
Query: 557 CFSYRT--KRILFDI*NKNVLGCGKTMNRNVWKRYVALHRRRRACNAPPSRYKPASNTPR 384
C SYR+ +R + ++ + MN N+W + ++ + N PS+Y AS
Sbjct: 227 CESYRSLFQRRIDGCKPRSFINNYSKMN-NIWNSSIDINSTKTLPNTKPSQYGQASRRKT 285
Query: 383 TAQRNGSLGPVERTHHGCGFTRATLATCVST 291
L + H GC T ST
Sbjct: 286 IVPMKVILVDSRKEHSGCNIQFGGFPTSSST 316
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = +3
Query: 648 RGPLEARPSHGPPHPSCLTVFP----KRSKAGQPH 740
R P+E S PPHP L V P + S A QPH
Sbjct: 251 RFPIEPHRSPSPPHPLVLVVHPAPQAQCSPACQPH 285
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 702 LNKTDVAARGLDVPRVDLVLQYCAPASATDYVH 604
L +D+ ARG+D V+LV+ A A+ Y H
Sbjct: 313 LVSSDLTARGIDADNVNLVVNIDAAANEETYFH 345
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 702 LNKTDVAARGLDVPRVDLVLQYCAPASATDYVH 604
L +D+ ARG+D V+LV+ A A+ Y H
Sbjct: 313 LVSSDLTARGIDADNVNLVVNIDAAANEETYFH 345
>AL032630-15|CAA21571.3| 331|Caenorhabditis elegans Hypothetical
protein Y62H9A.14 protein.
Length = 331
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Frame = -1
Query: 557 CFSYRT--KRILFDI*NKNVLGCGKTMNRNVWKRYVALHRRRRACNAPPSRYKPASNTPR 384
C SYR+ +R + ++ + MN N+W + ++ + N PS+Y AS
Sbjct: 227 CESYRSLFQRRIDGCKPRSFINNYSKMN-NIWNSSIDINSTKTLPNTKPSQYGQASRRKT 285
Query: 383 TAQRNGSLGPVERTHHGCGFTRATLATCVST 291
L + H GC T ST
Sbjct: 286 IVPMKVILVDSRKEHSGCNIQFGGFPTSSST 316
>AF098503-2|AAC67407.1| 115|Caenorhabditis elegans Hypothetical
protein H35N09.1 protein.
Length = 115
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 497 CGKTMNRNVWKRYVALHRRRRACNAPPSRYKPAS 396
C ++N + Y+ + CN+PP R KP S
Sbjct: 67 CMYSINTDTGNEYINCYCDYETCNSPPDRTKPLS 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,161,448
Number of Sequences: 27780
Number of extensions: 392932
Number of successful extensions: 1337
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -