Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_C13
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 37 0.021
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 34 0.11
03_01_0515 - 3864796-3865425 34 0.11
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 33 0.34
07_01_0479 + 3606663-3607448 32 0.45
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 31 1.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 3.2
10_03_0023 - 7151465-7152111,7152222-7152405 29 4.2
12_02_1174 - 26696869-26698191 29 5.6
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 5.6
09_02_0543 + 10427321-10428315,10428440-10429154 29 5.6
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 28 7.4
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 7.4
08_01_0059 - 394001-394708 28 7.4
07_03_0559 + 19475893-19476783 28 7.4
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 9.7
02_05_0149 + 26290236-26290880 28 9.7
02_01_0674 + 5020118-5020202,5020301-5020436,5021075-5021140,502... 28 9.7
01_01_0070 - 542603-542686,542803-543441 28 9.7
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
PP KP P P P P GP PP PPPP PP
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPP 366
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = +1
Query: 607 GPPXXXK--PFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPPKI 771
GPP P + P P TP P L P PP PP P P+ PP +
Sbjct: 1145 GPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPL 1201
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 653 PWGXGEPPXXXXXWAPXPPPXVFXPPPLXXXXPAAXP 763
P G PP AP PPP PPPL P P
Sbjct: 1124 PLPDGPPPLPLD--APPPPPLPEGPPPLPSDSPPCQP 1158
>03_01_0515 - 3864796-3865425
Length = 209
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPPK 768
PP P P P +P P L P PP PPPP P P K
Sbjct: 62 PPPAAGPLMPPPPPPPSVTSSPPPPP-LPPPPPPPAASPPPPPPSPPPPSPVK 113
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +1
Query: 613 PXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPPKI 771
P KP P G G P P P PP PPPP P PP+I
Sbjct: 245 PEANKPPAAPGTLPNGSGGPPRPPPPQVPPPPPQAPPPPPP--NAPMGMPPRI 295
>07_01_0479 + 3606663-3607448
Length = 261
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 8/62 (12%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXX---PXGXXGTPXXXPX-LGPLXPPX----GFXPPPPXXXXPRXXP 762
GPP PF + P P G P P + P PP G PPPP P P
Sbjct: 200 GPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPGQNP 259
Query: 763 PK 768
P+
Sbjct: 260 PQ 261
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +1
Query: 658 GXXGTPXXXPXLGPLXPPXGF--XPPPPXXXXPRXXPPKI 771
G G P P G + PP G P PP PR PP +
Sbjct: 33 GGGGAPPYRPASGFVWPPPGMTPRPGPPQPQYPRPGPPAV 72
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPP-PXXXXPRXXPP 765
PP KP F P P P PP PPP P P PP
Sbjct: 553 PPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPP 605
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Frame = +1
Query: 625 KPFFKNPXXPXGXXGTPXXXPXLGPLXPP------XGFXPPPPXXXXPRXXPP 765
+P+ +P P G G P P + P PP G PPP P PP
Sbjct: 5 RPYAPHPPPPQG--GFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPP 55
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPP---PPXXXXPRXXPP 765
PP P P P G P P G + PP G PP PP P PP
Sbjct: 13 PPQGGFPPQPPPMNPYGPP--PPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPP 65
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPPK 768
PP P+ N P P P P PP PPP PP+
Sbjct: 92 PPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPPPR 144
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXG-TPXXXPX--LGPLXPPXGFXPPPPXXXXPRXXPP 765
PP P F P P TP P + P+ P PPPP P PP
Sbjct: 196 PPSLVPPVFPTPSPPSILPPLTPQPPPSSLIPPVLPLPLLNPPPPPPPPPSLLPP 250
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 673 PXXXPXLGPLXPPXGFXPPPPXXXXPRXXPPKI 771
P P + P PP PPPP P PP +
Sbjct: 138 PHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSV 170
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +1
Query: 643 PXXPXGXXGTPXXXPXLGPLXP-PXGFXPPPPXXXXPRXXPP 765
P P T L P P P G PPPP P PP
Sbjct: 902 PRPPPAPSATANTASALSPPPPRPPGAPPPPPPPGKPGGPPP 943
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 673 PXXXPXLGPLXPPXGFXPPPPXXXXPRXXP 762
P P GP PP PPPP P+ P
Sbjct: 27 PPAIPESGPPPPPAPDMPPPPPTPAPQSSP 56
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 673 PXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
P P P P PPPP PR PP
Sbjct: 222 PPPPPPPSPHRHPAAHPPPPPHHPAPRPPPP 252
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 685 PXLGPLXPPXGFXPPPPXXXXPRXXPP 765
P PL PP PPPP P PP
Sbjct: 425 PPPPPLPPPPPPPPPPPPPLPPNMPPP 451
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 671 PPXXXXXWAPXPPPXVFXPPPLXXXXPAAXP 763
PP +AP PP PPP PA P
Sbjct: 36 PPPTPRPYAPPPPSHPLAPPPPHISPPAPVP 66
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 670 TPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
TP P P P PPPP P PP
Sbjct: 16 TPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPP 47
>07_03_0559 + 19475893-19476783
Length = 296
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 764 GGXXRGXXXIGGGGXKPXGGXRGPKXGFXLGVPXXPXGXXGFLKXGXXXXGG 609
GG G GGGG GG +G G GV G G G GG
Sbjct: 162 GGGGGGGFGGGGGGGIGGGGGKGGGFGAGGGVGGAAGGGGGMGSGGGGGFGG 213
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +1
Query: 643 PXXPXGXXGTPXXXPXLGPLXP-PXGFXPPPPXXXXPRXXPP 765
P P T L P P P G PPPP P PP
Sbjct: 597 PRPPPAPSATANTASALPPPPPRPPGAPPPPPPPGKPGGPPP 638
>02_05_0149 + 26290236-26290880
Length = 214
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 767 FGGXXRGXXXIGGGGXKPXGGXRGPKXGFXLGVPXXPXGXXG 642
FG G GGGG GG G GF G P G G
Sbjct: 91 FGFGYGGSRGEGGGGGGGGGGGSGRAYGFGGGYGGHPGGFGG 132
>02_01_0674 +
5020118-5020202,5020301-5020436,5021075-5021140,
5021219-5021290,5021362-5021433,5024242-5024301,
5024494-5024565,5024655-5024720,5024798-5024863,
5024945-5025273,5025713-5025969,5026213-5026484,
5026580-5026715,5026833-5026972,5027051-5027207,
5027476-5027634
Length = 714
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 694 GPLXPPXGFXPPPPXXXXPRXXPPK 768
GP PP F PPPP R P+
Sbjct: 241 GPAPPPPPFMPPPPRRPRNRPSHPR 265
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +1
Query: 610 PPXXXKPF-FKNPXXPXGXXGTPXXXPXLGPLXPPXGFX---PPPPXXXXPRXXPP 765
PP P P P P P + P+ PP PPPP P PP
Sbjct: 49 PPAPATPAPTATPTPPVAPAKAPPVAPAVAPVTPPPPTPKKAPPPPVTPPPVTPPP 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,844,370
Number of Sequences: 37544
Number of extensions: 167550
Number of successful extensions: 1498
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -