Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_C13
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein. 35 0.29
M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small nuc... 35 0.29
CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein. 35 0.29
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 35 0.29
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 35 0.29
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 35 0.29
AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear ribonucle... 35 0.29
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 35 0.29
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 35 0.29
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 35 0.38
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 35 0.38
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 35 0.38
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 34 0.51
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 34 0.51
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 34 0.51
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 34 0.51
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 34 0.51
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 33 0.89
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 33 0.89
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 33 0.89
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 33 0.89
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 33 0.89
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 33 0.89
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 33 0.89
X16163-1|CAA34288.1| 218|Homo sapiens SmB /B' autoimmune antige... 33 1.6
X15892-1|CAA33901.1| 240|Homo sapiens protein ( Human hcerN3 ge... 33 1.6
U41303-1|AAA98969.1| 240|Homo sapiens small nuclear ribonuleopr... 33 1.6
J04615-1|AAA36617.1| 240|Homo sapiens protein ( Human lupus aut... 33 1.6
CR450350-1|CAG29346.1| 240|Homo sapiens SNRPN protein. 33 1.6
BC025178-1|AAH25178.1| 240|Homo sapiens small nuclear ribonucle... 33 1.6
BC024777-1|AAH24777.1| 240|Homo sapiens SNURF protein protein. 33 1.6
BC003180-1|AAH03180.1| 240|Homo sapiens small nuclear ribonucle... 33 1.6
BC000611-1|AAH00611.1| 240|Homo sapiens SNRPN protein protein. 33 1.6
AK222633-1|BAD96353.1| 240|Homo sapiens small nuclear ribonucle... 33 1.6
AF400432-1|AAK92481.1| 240|Homo sapiens small nuclear ribonucle... 33 1.6
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 32 2.1
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 32 2.1
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 32 2.1
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 32 2.1
AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein pr... 32 2.1
AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open readi... 32 2.1
AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open readi... 32 2.1
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 32 2.1
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 32 2.1
AF134825-1|AAD54489.1| 243|Homo sapiens small nuclear ribonucle... 31 3.6
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 31 6.3
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.3
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.3
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.3
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 31 6.3
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.3
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.3
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.3
Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated ph... 30 8.3
X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated ph... 30 8.3
X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein. 30 8.3
S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein. 30 8.3
BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein. 30 8.3
BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein. 30 8.3
BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated ... 30 8.3
BC030530-1|AAH30530.1| 617|Homo sapiens synovial apoptosis inhi... 30 8.3
BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated ... 30 8.3
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 30 8.3
AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor... 30 8.3
AK074148-1|BAB84974.1| 298|Homo sapiens FLJ00221 protein protein. 30 8.3
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein. 30 8.3
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 30 8.3
AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein. 30 8.3
AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein. 30 8.3
AB024690-1|BAC57449.1| 617|Homo sapiens Synoviolin1 protein. 30 8.3
>X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein.
Length = 240
Score = 35.1 bits (77), Expect = 0.29
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
GPP +P P GTP P G PP G PPPP PR
Sbjct: 190 GPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPR 239
>M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB' mRNA, 3' end. ).
Length = 233
Score = 35.1 bits (77), Expect = 0.29
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
GPP +P P GTP P G PP G PPPP PR
Sbjct: 183 GPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPR 232
>CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein.
Length = 240
Score = 35.1 bits (77), Expect = 0.29
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
GPP +P P GTP P G PP G PPPP PR
Sbjct: 190 GPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPR 239
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 35.1 bits (77), Expect = 0.29
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXP--XG------XXGTPXXXPXLGPLXPPXGFXP-PPPXXXXPRXX 759
GPP PF + P P G G P P P PP G P PPP PR
Sbjct: 433 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLP 492
Query: 760 PP 765
PP
Sbjct: 493 PP 494
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +1
Query: 610 PPXXXKPF-FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
PP P + P P P P L P PP G P PP P PP
Sbjct: 393 PPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPP 445
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 35.1 bits (77), Expect = 0.29
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXP--XG------XXGTPXXXPXLGPLXPPXGFXP-PPPXXXXPRXX 759
GPP PF + P P G G P P P PP G P PPP PR
Sbjct: 192 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLP 251
Query: 760 PP 765
PP
Sbjct: 252 PP 253
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +1
Query: 610 PPXXXKPF-FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
PP P + P P P P L P PP G P PP P PP
Sbjct: 152 PPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPP 204
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 35.1 bits (77), Expect = 0.29
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXP--XG------XXGTPXXXPXLGPLXPPXGFXP-PPPXXXXPRXX 759
GPP PF + P P G G P P P PP G P PPP PR
Sbjct: 433 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLP 492
Query: 760 PP 765
PP
Sbjct: 493 PP 494
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +1
Query: 610 PPXXXKPF-FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
PP P + P P P P L P PP G P PP P PP
Sbjct: 393 PPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPP 445
>AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 240
Score = 35.1 bits (77), Expect = 0.29
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
GPP +P P GTP P G PP G PPPP PR
Sbjct: 190 GPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPR 239
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 35.1 bits (77), Expect = 0.29
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXP--XG------XXGTPXXXPXLGPLXPPXGFXP-PPPXXXXPRXX 759
GPP PF + P P G G P P P PP G P PPP PR
Sbjct: 433 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLP 492
Query: 760 PP 765
PP
Sbjct: 493 PP 494
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +1
Query: 610 PPXXXKPF-FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
PP P + P P P P L P PP G P PP P PP
Sbjct: 393 PPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPP 445
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 35.1 bits (77), Expect = 0.29
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXP--XG------XXGTPXXXPXLGPLXPPXGFXP-PPPXXXXPRXX 759
GPP PF + P P G G P P P PP G P PPP PR
Sbjct: 433 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLP 492
Query: 760 PP 765
PP
Sbjct: 493 PP 494
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +1
Query: 610 PPXXXKPF-FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
PP P + P P P P L P PP G P PP P PP
Sbjct: 393 PPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPP 445
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 34.7 bits (76), Expect = 0.38
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +1
Query: 643 PXXPXGXXGTPXXXPXLGPLXPPXGFXPP--PPXXXXPRXXPP 765
P P G P P + P+ PP G PP PP P PP
Sbjct: 60 PPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPP 102
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Frame = +1
Query: 610 PPXXXKPFFKN--PXXPXGXXGTPXXXPXLGP---LXPPXGFXPPPPXXXXPRXXPP 765
PP PF N P P G P P L + PP PPPP P PP
Sbjct: 65 PPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMPP 121
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 34.7 bits (76), Expect = 0.38
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +1
Query: 643 PXXPXGXXGTPXXXPXLGPLXPPXGFXPP--PPXXXXPRXXPP 765
P P G P P + P+ PP G PP PP P PP
Sbjct: 60 PPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPP 102
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Frame = +1
Query: 610 PPXXXKPFFKN--PXXPXGXXGTPXXXPXLGP---LXPPXGFXPPPPXXXXPRXXPP 765
PP PF N P P G P P L + PP PPPP P PP
Sbjct: 65 PPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMPP 121
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 34.7 bits (76), Expect = 0.38
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +1
Query: 643 PXXPXGXXGTPXXXPXLGPLXPPXGFXPP--PPXXXXPRXXPP 765
P P G P P + P+ PP G PP PP P PP
Sbjct: 64 PPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPP 106
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Frame = +1
Query: 610 PPXXXKPFFKN--PXXPXGXXGTPXXXPXLGP---LXPPXGFXPPPPXXXXPRXXPP 765
PP PF N P P G P P L + PP PPPP P PP
Sbjct: 69 PPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMPP 125
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 34.3 bits (75), Expect = 0.51
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
GPP P + P P G P P GPL PP PPP P PP
Sbjct: 304 GPPPGPPPPQQGPPPPPGPF--PPRPP--GPLGPPLTLAPPPHLPGPPPGAPP 352
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = +1
Query: 643 PXXPXGXXGTPXXXPXLGPLXP----PXGFXPPPPXXXXPRXXPP 765
P P G P P LGPL P P PPP P+ PP
Sbjct: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 34.3 bits (75), Expect = 0.51
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
GPP P + P P G P P GPL PP PPP P PP
Sbjct: 304 GPPPGPPPPQQGPPPPPGPF--PPRPP--GPLGPPLTLAPPPHLPGPPPGAPP 352
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = +1
Query: 643 PXXPXGXXGTPXXXPXLGPLXP----PXGFXPPPPXXXXPRXXPP 765
P P G P P LGPL P P PPP P+ PP
Sbjct: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 34.3 bits (75), Expect = 0.51
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
GPP P + P P G P P GPL PP PPP P PP
Sbjct: 231 GPPPGPPPPQQGPPPPPGPF--PPRPP--GPLGPPLTLAPPPHLPGPPPGAPP 279
Score = 32.3 bits (70), Expect = 2.1
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Frame = +1
Query: 607 GPPXXXKPFFKN-PXXPXGXXGTPXXXPXLGPLXP----PXGFXPPPPXXXXPRXXPP 765
GPP P + P P G P P LGPL P P PPP P+ PP
Sbjct: 187 GPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 244
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 34.3 bits (75), Expect = 0.51
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
GPP P + P P G P P GPL PP PPP P PP
Sbjct: 341 GPPPGPPPPQQGPPPPPGPF--PPRPP--GPLGPPLTLAPPPHLPGPPPGAPP 389
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = +1
Query: 643 PXXPXGXXGTPXXXPXLGPLXP----PXGFXPPPPXXXXPRXXPP 765
P P G P P LGPL P P PPP P+ PP
Sbjct: 310 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 354
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 34.3 bits (75), Expect = 0.51
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
GPP P + P P G P P GPL PP PPP P PP
Sbjct: 304 GPPPGPPPPQQGPPPPPGPF--PPRPP--GPLGPPLTLAPPPHLPGPPPGAPP 352
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = +1
Query: 643 PXXPXGXXGTPXXXPXLGPLXP----PXGFXPPPPXXXXPRXXPP 765
P P G P P LGPL P P PPP P+ PP
Sbjct: 273 PPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 33.5 bits (73), Expect = 0.89
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 634 FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPP 735
FK P G G P +GP+ PP GF PP P
Sbjct: 598 FKGERGPPGNPGLPGLPGNIGPMGPP-GFGPPGP 630
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 33.5 bits (73), Expect = 0.89
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 634 FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPP 735
FK P G G P +GP+ PP GF PP P
Sbjct: 598 FKGERGPPGNPGLPGLPGNIGPMGPP-GFGPPGP 630
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 33.5 bits (73), Expect = 0.89
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 634 FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPP 735
FK P G G P +GP+ PP GF PP P
Sbjct: 598 FKGERGPPGNPGLPGLPGNIGPMGPP-GFGPPGP 630
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 33.5 bits (73), Expect = 0.89
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 634 FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPP 735
FK P G G P +GP+ PP GF PP P
Sbjct: 206 FKGERGPPGNPGLPGLPGNIGPMGPP-GFGPPGP 238
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.5 bits (73), Expect = 0.89
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 634 FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPP 735
FK P G G P +GP+ PP GF PP P
Sbjct: 598 FKGERGPPGNPGLPGLPGNIGPMGPP-GFGPPGP 630
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.5 bits (73), Expect = 0.89
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 634 FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPP 735
FK P G G P +GP+ PP GF PP P
Sbjct: 598 FKGERGPPGNPGLPGLPGNIGPMGPP-GFGPPGP 630
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.5 bits (73), Expect = 0.89
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 634 FKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPP 735
FK P G G P +GP+ PP GF PP P
Sbjct: 598 FKGERGPPGNPGLPGLPGNIGPMGPP-GFGPPGP 630
>X16163-1|CAA34288.1| 218|Homo sapiens SmB /B' autoimmune antigene
protein.
Length = 218
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 169 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 217
>X15892-1|CAA33901.1| 240|Homo sapiens protein ( Human hcerN3 gene
mRNA for N snRNP associated protein. ).
Length = 240
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 239
>U41303-1|AAA98969.1| 240|Homo sapiens small nuclear
ribonuleoprotein particle N protein.
Length = 240
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 239
>J04615-1|AAA36617.1| 240|Homo sapiens protein ( Human lupus
autoantigen (small nuclear ribonuclepoprotein, snRNP,
SM-D) mRNA, complete cds. ).
Length = 240
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 239
>CR450350-1|CAG29346.1| 240|Homo sapiens SNRPN protein.
Length = 240
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 239
>BC025178-1|AAH25178.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptide N protein.
Length = 240
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 239
>BC024777-1|AAH24777.1| 240|Homo sapiens SNURF protein protein.
Length = 240
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 239
>BC003180-1|AAH03180.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptide N protein.
Length = 240
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 239
>BC000611-1|AAH00611.1| 240|Homo sapiens SNRPN protein protein.
Length = 240
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 239
>AK222633-1|BAD96353.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptide N variant protein.
Length = 240
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 239
>AF400432-1|AAK92481.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptide N protein.
Length = 240
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
PP +P P GTP P G PP G PPPP PR
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPR 239
>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXP--PPPXXXXPRXXPP 765
PP P P P P P P+ P GF P PPP P PP
Sbjct: 702 PPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPP 755
>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXP--PPPXXXXPRXXPP 765
PP P P P P P P+ P GF P PPP P PP
Sbjct: 702 PPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPP 755
>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1146
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXP--PPPXXXXPRXXPP 765
PP P P P P P P+ P GF P PPP P PP
Sbjct: 702 PPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPP 755
>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXP--PPPXXXXPRXXPP 765
PP P P P P P P+ P GF P PPP P PP
Sbjct: 702 PPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPP 755
>AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein
protein.
Length = 667
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXP--PPPXXXXPRXXPP 765
PP P P P P P P+ P GF P PPP P PP
Sbjct: 513 PPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPP 566
>AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open reading
frame 45 protein.
Length = 1137
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
PP +P +P P P L P PP PPPP P PP
Sbjct: 892 PPTHGRPVIASPSYPC-HSAIPHAGASLPPPPPPPPPPPPPPPPPPPPPPPP 942
>AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open reading
frame 45 protein.
Length = 1137
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
PP +P +P P P L P PP PPPP P PP
Sbjct: 892 PPTHGRPVIASPSYPC-HSAIPHAGASLPPPPPPPPPPPPPPPPPPPPPPPP 942
>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR
protein rA4 protein.
Length = 1157
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXP--PPPXXXXPRXXPP 765
PP P P P P P P+ P GF P PPP P PP
Sbjct: 712 PPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPP 765
>AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein.
Length = 929
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXP--PPPXXXXPRXXPP 765
PP P P P P P P+ P GF P PPP P PP
Sbjct: 506 PPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPP 559
>AF134825-1|AAD54489.1| 243|Homo sapiens small nuclear
ribonucleoprotein B' protein.
Length = 243
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPR 753
GP + + +P GTP P G PP G PPPP PR
Sbjct: 193 GPTSWYETSYGSPNGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPR 242
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLG----PLXPPXGF--XPPPPXXXXPRXXPP 765
GPP P P G G P P G P PP G+ P PP PR P
Sbjct: 355 GPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVP 413
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLG----PLXPPXGF--XPPPPXXXXPRXXPP 765
GPP P P G G P P G P PP G+ P PP PR P
Sbjct: 355 GPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVP 413
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLG----PLXPPXGF--XPPPPXXXXPRXXPP 765
GPP P P G G P P G P PP G+ P PP PR P
Sbjct: 355 GPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVP 413
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLG----PLXPPXGF--XPPPPXXXXPRXXPP 765
GPP P P G G P P G P PP G+ P PP PR P
Sbjct: 355 GPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVP 413
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGF-XPPPPXXXXPRXXPPKI 771
PP +P P TP P P PP PPPP P PP++
Sbjct: 1968 PPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQV 2022
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLG----PLXPPXGF--XPPPPXXXXPRXXPP 765
GPP P P G G P P G P PP G+ P PP PR P
Sbjct: 355 GPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVP 413
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLG----PLXPPXGF--XPPPPXXXXPRXXPP 765
GPP P P G G P P G P PP G+ P PP PR P
Sbjct: 355 GPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVP 413
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLG----PLXPPXGF--XPPPPXXXXPRXXPP 765
GPP P P G G P P G P PP G+ P PP PR P
Sbjct: 355 GPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVP 413
>Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein (VASP) protein.
Length = 380
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 694 GPLXPPXGFXPPPPXXXXPRXXPP 765
GP PP G PPPP P PP
Sbjct: 161 GPPAPPAGGPPPPPGPPPPPGPPP 184
>X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 378
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 694 GPLXPPXGFXPPPPXXXXPRXXPP 765
GP PP G PPPP P PP
Sbjct: 159 GPPAPPAGGPPPPPGPPPPPGPPP 182
>X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein.
Length = 234
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPX---LGPLXPPXGFXPPPP 735
GPP KP + P P G P P GP PP G PP P
Sbjct: 183 GPPPPGKP--QGPPPPGGNPQQPQAPPAGKPQGPPPPPQGGRPPRP 226
>S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein.
Length = 238
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPX---LGPLXPPXGFXPPPP 735
GPP KP + P P G P P GP PP G PP P
Sbjct: 187 GPPPPGKP--QGPPPPGGNPQQPQAPPAGKPQGPPPPPQGGRPPRP 230
>BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein.
Length = 268
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPX---LGPLXPPXGFXPPPP 735
GPP KP + P P G P P GP PP G PP P
Sbjct: 217 GPPPPGKP--QGPPPPGGNPQQPQAPPAGKPQGPPPPPQGGRPPRP 260
>BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein.
Length = 183
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPX---LGPLXPPXGFXPPPP 735
GPP KP + P P G P P GP PP G PP P
Sbjct: 127 GPPPPGKP--QGPPPPGGNPQQPQAPPAGKPQGPPPPPQGGRPPRP 170
>BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 694 GPLXPPXGFXPPPPXXXXPRXXPP 765
GP PP G PPPP P PP
Sbjct: 161 GPPAPPAGGPPPPPGPPPPPGPPP 184
>BC030530-1|AAH30530.1| 617|Homo sapiens synovial apoptosis
inhibitor 1, synoviolin protein.
Length = 617
Score = 30.3 bits (65), Expect = 8.3
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGT-PXXXPXLGPLXPPXG-FXP-PPPXXXXPRXXPP 765
GPP P P P G P P + PL PP G F P PPP PP
Sbjct: 352 GPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPP 407
>BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 694 GPLXPPXGFXPPPPXXXXPRXXPP 765
GP PP G PPPP P PP
Sbjct: 162 GPPAPPAGGPPPPPGPPPPPGPPP 185
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +2
Query: 653 PWGXGEPPXXXXXWA-PXPPPXVFXPP--PLXXXXPAAXPQKF 772
P G G PP + P PPP F PP P P A P F
Sbjct: 281 PQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAF 323
>AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor
2D/deleted in azoospermia associated protein 1 fusion p
protein.
Length = 474
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +2
Query: 653 PWGXGEPPXXXXXWA-PXPPPXVFXPP--PLXXXXPAAXPQKF 772
P G G PP + P PPP F PP P P A P F
Sbjct: 348 PQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAF 390
>AK074148-1|BAB84974.1| 298|Homo sapiens FLJ00221 protein protein.
Length = 298
Score = 30.3 bits (65), Expect = 8.3
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGT-PXXXPXLGPLXPPXG-FXP-PPPXXXXPRXXPP 765
GPP P P P G P P + PL PP G F P PPP PP
Sbjct: 221 GPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPP 276
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +2
Query: 653 PWGXGEPPXXXXXWA-PXPPPXVFXPP--PLXXXXPAAXPQKF 772
P G G PP + P PPP F PP P P A P F
Sbjct: 192 PQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAF 234
>AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 30.3 bits (65), Expect = 8.3
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGT-PXXXPXLGPLXPPXG-FXP-PPPXXXXPRXXPP 765
GPP P P P G P P + PL PP G F P PPP PP
Sbjct: 352 GPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPP 407
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +2
Query: 653 PWGXGEPPXXXXXWA-PXPPPXVFXPP--PLXXXXPAAXPQKF 772
P G G PP + P PPP F PP P P A P F
Sbjct: 281 PQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAF 323
>AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 30.3 bits (65), Expect = 8.3
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGT-PXXXPXLGPLXPPXG-FXP-PPPXXXXPRXXPP 765
GPP P P P G P P + PL PP G F P PPP PP
Sbjct: 352 GPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPP 407
>AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein.
Length = 579
Score = 30.3 bits (65), Expect = 8.3
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGT-PXXXPXLGPLXPPXG-FXP-PPPXXXXPRXXPP 765
GPP P P P G P P + PL PP G F P PPP PP
Sbjct: 315 GPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPP 370
>AB024690-1|BAC57449.1| 617|Homo sapiens Synoviolin1 protein.
Length = 617
Score = 30.3 bits (65), Expect = 8.3
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGT-PXXXPXLGPLXPPXG-FXP-PPPXXXXPRXXPP 765
GPP P P P G P P + PL PP G F P PPP PP
Sbjct: 352 GPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPP 407
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,186,171
Number of Sequences: 237096
Number of extensions: 916103
Number of successful extensions: 7007
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 2484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5358
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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