Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_C13
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.10
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.13
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.13
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.41
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.41
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.41
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 0.71
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 3.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.8
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 5.0
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 28 6.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 8.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Frame = +2
Query: 602 FXXPPXXXNXFLKTXXXPWGXGEPPXXXXXWAPXPPPX---VFXPPPLXXXXPAAXP 763
F PP N F+ P G PP P PPP + PPP+ P P
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 652 PXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
P G+P P P PP G PPPP P PP
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXP 762
G P P +P P G+P P G PP PPPP P P
Sbjct: 235 GSPPPPPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 610 PPXXXKPFF-KNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPPK 768
PP P P G+P P PP G PPPP P PP+
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP--PPPR 293
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 652 PXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
P G+P P P PP G PPPP P PP
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXP 762
G P P +P P G+P P G PP PPPP P P
Sbjct: 256 GSPPPPPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 610 PPXXXKPFF-KNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPPK 768
PP P P G+P P PP G PPPP P PP+
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP--PPPR 314
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 652 PXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
P G+P P P PP G PPPP P PP
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXP 762
G P P +P P G+P P G PP PPPP P P
Sbjct: 241 GSPPPPPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 610 PPXXXKPFF-KNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPPK 768
PP P P G+P P PP G PPPP P PP+
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP--PPPR 299
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXP 750
PP P P P G P P PP G PPPP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXP----PPPXXXXPRXXPP 765
PP P P P G P P PP G P PPP P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXP 750
PP P P P G P P PP G PPPP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXP----PPPXXXXPRXXPP 765
PP P P P G P P PP G P PPP P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXP 750
PP P P P G P P PP G PPPP P
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXP----PPPXXXXPRXXPP 765
PP P P P G P P PP G P PPP P PP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Frame = +1
Query: 610 PPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPP-----PPXXXXPRXXPPKIF 774
PP F N P G G P P PP G PP PP P PP +F
Sbjct: 695 PPGVPPMFNLNAPPPPGIPGYP-------PAPPPPGVGPPPPQGIPPMGFDPNKPPPPMF 747
Query: 775 XKXFS 789
+ F+
Sbjct: 748 QQGFN 752
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPP--PXXXXPRXXPPKIF 774
GPP P P G P P G + PP GF PPP P P PP F
Sbjct: 716 GPPGPPGP----QQHPGPYPGYPGYGPP-GAMRPPAGFAPPPGAPYGYPPGAPPPAGF 768
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 671 PPXXXXXWAPXPPPXVFXPPPLXXXXPAAXPQ 766
PP P PPP PPP+ P PQ
Sbjct: 256 PPCPMPIPCPPPPPACSCPPPVTMYQPCMVPQ 287
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 698 PXPPPXVFXPPPLXXXXPAAXPQKF 772
P PPP + PPPL P P +F
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQF 55
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +2
Query: 656 WGXGEPPXXXXXWAPXPPPXVFXPPPLXXXXPAAXP 763
W G PP PPP + PPP P P
Sbjct: 1569 WRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPP 1604
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +2
Query: 653 PWGXGEPPXXXXXWAPXPPPXVFXPPPLXXXXP 751
PW P W P PPP + PP+ P
Sbjct: 184 PWRRMNPLNADAEWKPPPPPPMPGKPPIVPQSP 216
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +2
Query: 653 PWGXGEPPXXXXXWAPXPPPXVFXPPPLXXXXP 751
PW P W P PPP + PP+ P
Sbjct: 184 PWRRMNPLNADAEWKPPPPPPMPGKPPIVPQSP 216
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 607 GPPXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPP 729
GPP P K P G GTP GP PP PP
Sbjct: 192 GPPGKQGP--KGPNGEPGAPGTPGGNALPGPPGPPGPQGPP 230
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +1
Query: 613 PXXXKPFFKNPXXPXGXXGTPXXXPXLGPLXPPXGFXPPPPXXXXPRXXPP 765
P +P P P G GTP GP P G P P PP
Sbjct: 159 PPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPP 209
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 694 GPLXPPXGFXPPPPXXXXP 750
GP+ PP GF PPP P
Sbjct: 134 GPMQPPHGFAPPPMGGGVP 152
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 700 LXPPXGFXPPPPXXXXPRXXP 762
+ PP GF PPPP P P
Sbjct: 289 MPPPFGFFPPPPRGHFPPPPP 309
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 700 LXPPXGFXPPPPXXXXPRXXP 762
+ PP GF PPPP P P
Sbjct: 289 MPPPFGFFPPPPRGHFPPPPP 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,547,875
Number of Sequences: 27780
Number of extensions: 109677
Number of successful extensions: 754
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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