Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_C11
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical ...   110   9e-25
Z81086-5|CAB03119.2|  182|Caenorhabditis elegans Hypothetical pr...    56   2e-08
Z68134-2|CAA92223.1|  182|Caenorhabditis elegans Hypothetical pr...    53   2e-07
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical
           protein Y116A8A.9 protein.
          Length = 444

 Score =  110 bits (265), Expect = 9e-25
 Identities = 46/57 (80%), Positives = 52/57 (91%)
 Frame = -2

Query: 607 RAGASRYAMALKDLCDKGVVDAYPPLCDIKGCYTAQFEHTILLRPTCKEVVSRGDDY 437
           R G ++Y MALKDLCDKG+VD YPPLCD+KGCYTAQ+EHTIL+RPT KEVVSRGDDY
Sbjct: 388 RLGETKYLMALKDLCDKGIVDPYPPLCDVKGCYTAQWEHTILMRPTVKEVVSRGDDY 444



 Score = 61.7 bits (143), Expect = 6e-10
 Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = -3

Query: 756 GQVHDEHGLLSLHENFD--QQFVPLRLQSSKQLLNVINKNFGTLAFCKRWLDAPG 598
           G VHD+       +NF+   + +PLRLQ SK LLN+I+KNF TLAFC+RW+D  G
Sbjct: 336 GYVHDDMETSHYMKNFELADEKIPLRLQKSKGLLNLIDKNFATLAFCRRWIDRLG 390



 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 776 TFGSTGRVKFTTNMDCSHYMK 714
           TFGSTG+     +M+ SHYMK
Sbjct: 329 TFGSTGKGYVHDDMETSHYMK 349


>Z81086-5|CAB03119.2|  182|Caenorhabditis elegans Hypothetical
           protein F53B6.5 protein.
          Length = 182

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = -3

Query: 756 GQVHDEHGLLSLHENFD--QQFVPLRLQSSKQLLNVINKNFGTLAFCKRWLDAPG 598
           G  HD+       +NF+   + +PLRLQ SK LLN+I+KNF TLAFC+ W+D  G
Sbjct: 87  GYFHDDMETSHYMKNFELADEKIPLRLQKSKGLLNLIDKNFATLAFCRCWIDRLG 141



 Score = 31.5 bits (68), Expect = 0.70
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -1

Query: 776 TFGSTGRVKFTTNMDCSHYMK 714
           TFGSTG+  F  +M+ SHYMK
Sbjct: 80  TFGSTGKGYFHDDMETSHYMK 100


>Z68134-2|CAA92223.1|  182|Caenorhabditis elegans Hypothetical
           protein T27A8.3 protein.
          Length = 182

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
 Frame = -3

Query: 756 GQVHDEHGLLSLHENFD--QQFVPLRLQSSKQLLNVINKNFGTLAFCKRWLD 607
           G  HD+       +NF+   + +PLRLQ SK LL +I+KNF TLAFC+ W+D
Sbjct: 87  GYFHDDMETSHYMKNFELADEKIPLRLQKSKGLLKLIDKNFATLAFCRCWID 138



 Score = 31.5 bits (68), Expect = 0.70
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -1

Query: 776 TFGSTGRVKFTTNMDCSHYMK 714
           TFGSTG+  F  +M+ SHYMK
Sbjct: 80  TFGSTGKGYFHDDMETSHYMK 100


>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
           protein M01E10.2 protein.
          Length = 1286

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 573 RTSATRGWWTPTRPSATSRGATPHSSNTPSCSDPPAR 463
           +T  T+  W P  P  T+   TP ++  P  + PP R
Sbjct: 391 QTPRTKQTWAPWTPPTTTTRQTPPTTQAPPITPPPYR 427


>Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical protein
            R134.2 protein.
          Length = 1118

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -3

Query: 570  TSATRGWWTPTRPSATSRGATPHSSNTPSCSDP 472
            T A   W TP  P    R  + H S  PS  DP
Sbjct: 1070 TVANERWITPPAPKPEIRSVSSHGSRPPSVYDP 1102


>U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical
           protein C25F6.3 protein.
          Length = 1059

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 525 TSRGATPHSSNTPSCSDPPARKSCPVAM 442
           + RGA   +     C+D P +KSCP  +
Sbjct: 83  SERGALKEAMRCLKCADAPCQKSCPTQL 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,132,378
Number of Sequences: 27780
Number of extensions: 348557
Number of successful extensions: 885
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)