BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_C01
(792 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosylt... 25 2.7
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 25 3.5
>DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein
O-fucosyltransferase 2 protein.
Length = 451
Score = 25.0 bits (52), Expect = 2.7
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 576 VYAGRVSEHYTCIGHDGAYASFVXVSPLFLXDILLRLHIXG 698
V+ + EH GHDGA A F + F D LH G
Sbjct: 171 VFVDKFEEHVCPKGHDGALAYFGYGN--FTADAFTCLHFQG 209
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 24.6 bits (51), Expect = 3.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 644 YKTXIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIA 531
Y +RP++ YAS+++ + IQ F R+A
Sbjct: 821 YYALVRPLLEYASIIWNPPTIDGCSRIESIQRLFTRVA 858
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,443
Number of Sequences: 2352
Number of extensions: 12688
Number of successful extensions: 43
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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