Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_B24
(841 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein. 36 0.14
AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens ... 36 0.14
BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.24
BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.24
AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein pr... 36 0.24
AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein pr... 36 0.24
AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens ... 36 0.24
Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate 5-... 35 0.42
L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein. 35 0.42
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 35 0.42
BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein. 34 0.74
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 33 0.97
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 33 0.97
AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein. 33 1.3
AL162741-4|CAI23246.1| 255|Homo sapiens tumor necrosis factor r... 32 2.3
AF241229-1|AAF63506.1| 255|Homo sapiens GITR-D protein. 32 2.3
M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 32 3.0
M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 32 3.0
BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transc... 32 3.0
BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transc... 32 3.0
BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein. 32 3.0
BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B associ... 32 3.0
BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein. 32 3.0
AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transc... 32 3.0
AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated trans... 32 3.0
AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated trans... 32 3.0
AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein... 32 3.0
AB002348-1|BAA20807.3| 1062|Homo sapiens KIAA0350 protein protein. 31 5.2
BC132861-1|AAI32862.1| 276|Homo sapiens hypothetical protein LO... 31 6.9
BC126240-1|AAI26241.1| 276|Homo sapiens hypothetical protein LO... 31 6.9
BC042202-1|AAH42202.1| 384|Homo sapiens AKNA protein protein. 31 6.9
BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein. 31 6.9
BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adap... 31 6.9
AY703044-1|AAU34191.1| 1358|Homo sapiens AKNA transcript E protein. 31 6.9
AY703043-1|AAU34190.1| 1439|Homo sapiens AKNA transcript D protein. 31 6.9
AY703040-1|AAU34187.1| 1364|Homo sapiens AKNA transcript B1 prot... 31 6.9
AY703039-1|AAU34186.1| 1320|Homo sapiens AKNA transcript A protein. 31 6.9
AY560599-1|AAS72997.1| 863|Homo sapiens ADAM15 isoform 6b protein. 31 6.9
AY560598-1|AAS72996.1| 862|Homo sapiens ADAM15 isoform 6a protein. 31 6.9
AY560597-1|AAS72995.1| 838|Homo sapiens ADAM15 isoform 5 protein. 31 6.9
AL356796-6|CAI16862.2| 1439|Homo sapiens AT-hook transcription f... 31 6.9
AL356796-5|CAM23638.1| 1358|Homo sapiens AT-hook transcription f... 31 6.9
AL356796-4|CAI16861.1| 899|Homo sapiens AT-hook transcription f... 31 6.9
AK131082-1|BAC85132.1| 1495|Homo sapiens FLJ00281 protein protein. 31 6.9
AK123670-1|BAC85673.1| 276|Homo sapiens protein ( Homo sapiens ... 31 6.9
AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1 prot... 31 6.9
AF314227-5|AAS48593.1| 838|Homo sapiens ADAM15 isoform 5 protein. 31 6.9
AF314227-4|AAS48594.1| 862|Homo sapiens ADAM15 isoform 6a protein. 31 6.9
AF314227-2|AAS48595.1| 863|Homo sapiens ADAM15 isoform 6b protein. 31 6.9
AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor... 31 6.9
AB209157-1|BAD92394.1| 859|Homo sapiens ADAM15 isoform 6a varia... 31 6.9
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 27 7.7
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 27 8.6
DQ421853-1|ABD77575.1| 500|Homo sapiens synaptojanin 1 protein. 30 9.1
BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein. 30 9.1
BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein. 30 9.1
BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein. 30 9.1
AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein. 30 9.1
AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein. 30 9.1
AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein p... 30 9.1
>BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein.
Length = 276
Score = 36.3 bits (80), Expect = 0.14
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
Frame = +1
Query: 139 PLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDA-----QPTEPSRRIEGS 303
P +LL P + P++ G L S L P K QP P R + G
Sbjct: 118 PSRPRRSLLRPRQPQRLVEAPEQPGPLTPSLLGPGRPRQQKQPLMGPEQPCPPKRPLMGP 177
Query: 304 ETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRRPV--ALITPRQ 450
E +R +GP + C+ P +P R SL G+ RP+ L PR+
Sbjct: 178 EQPCQPLRPLMGPNKPCKPQPLLPIPDRPSLLGQPGPPCRPLLGLLCQPRR 228
>AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ39402 fis, clone PLACE6011975. ).
Length = 180
Score = 36.3 bits (80), Expect = 0.14
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 187 RGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSV-RQPVGPPRRCRWC 363
RG+ + GG P L G HP +P EP R E + + SV P GP R R C
Sbjct: 83 RGRRQGQGGGAPALLLPRPGCRHPHPPRP-EPRLRAEPGKVTGASVPAPPSGPLPRLRPC 141
Query: 364 PG 369
G
Sbjct: 142 CG 143
>BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.24
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 304
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.24
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 304
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein
protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.24
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 304
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein
protein.
Length = 165
Score = 35.5 bits (78), Expect = 0.24
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 304
P GP GYS +PA P GR GLP R RR+
Sbjct: 78 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 110
>AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ25530 fis, clone CBR07652. ).
Length = 416
Score = 35.5 bits (78), Expect = 0.24
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 304
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate
5-phosphatase protein.
Length = 1258
Score = 34.7 bits (76), Expect = 0.42
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 285
P DF PL DS L P+ DPL G GG + P AHP+ P PS
Sbjct: 1050 PPDFPPPPLPDSAIFLPPSLDPLPGPVVRGRGG-AEARGPPPPKAHPRPPLPPGPS 1104
>L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein.
Length = 1149
Score = 34.7 bits (76), Expect = 0.42
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 285
P DF PL DS L P+ DPL G GG + P AHP+ P PS
Sbjct: 986 PPDFPPPPLPDSAIFLPPSLDPLPGPVVRGRGG-AEARGPPPPKAHPRPPLPPGPS 1040
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 34.7 bits (76), Expect = 0.42
Identities = 31/107 (28%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT LP R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGLPPREGPSRR 2139
>BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein.
Length = 765
Score = 33.9 bits (74), Expect = 0.74
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Frame = +1
Query: 121 KDFRTHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTL----QPDGAAHPKDAQPTEPSR 288
+DFR P +D HP + R P+ GGLP+ST Q HP+ P R
Sbjct: 601 EDFRCPPEDD---FRHPREEDWRRPPPEHFGGLPQSTSGGHPQSTSGGHPQSISGARP-R 656
Query: 289 RIEGSETSAVS---VRQPVGPPRR 351
G ++S +R G P R
Sbjct: 657 STSGDRPRSISGGHLRSISGAPER 680
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.97
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -2
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLP 325
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.97
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -2
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLP 325
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein.
Length = 1269
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 470 RAARPHPLRSPLDLHRGGGRHLQGPGRTGVFPPPA---PGSTATDR 598
R ARP P + L RG G HLQ PGR G+ PA PG+ R
Sbjct: 1139 RPARPAPAGAALRPRRGAGPHLQPPGR-GLPAAPALLFPGAAVPGR 1183
>AL162741-4|CAI23246.1| 255|Homo sapiens tumor necrosis factor
receptor superfamily, member 18 protein.
Length = 255
Score = 32.3 bits (70), Expect = 2.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 238 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 378
P+ A+ P+ + ++ RR G ET +P GPP PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191
>AF241229-1|AAF63506.1| 255|Homo sapiens GITR-D protein.
Length = 255
Score = 32.3 bits (70), Expect = 2.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 238 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 378
P+ A+ P+ + ++ RR G ET +P GPP PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191
>M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) gene, 3' end. ).
Length = 2142
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 2020 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2079
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2080 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2124
>M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) mRNA, complete cds.
).
Length = 2142
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 2020 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2079
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2080 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2124
>BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein.
Length = 2157
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B
associated transcript 2 protein.
Length = 696
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 574 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 633
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 634 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 678
>BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 2035 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 2094
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 2095 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein
protein.
Length = 1537
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Frame = +1
Query: 118 PKDFRTHPLNDSPALLHPTS-DPLRGQNP--DEVGGLPRSTLQPDGAAHP--KDAQPTEP 282
P R P + A LHP P + +GG S P G + P
Sbjct: 1415 PSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATP 1474
Query: 283 SRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 423
S T V + Q PP RW P W RT P R+ RR
Sbjct: 1475 STYSGVFRTQRVDLYQQASPPDALRWIP--KPWERTGPPPREGPSRR 1519
>AB002348-1|BAA20807.3| 1062|Homo sapiens KIAA0350 protein protein.
Length = 1062
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 242 SGCSVDRGSPPTSSGF*PRRGSDVGCKSAGESFSGWVLKSLGPRSAHNTMQIVESHIP 69
S S+ SPP++SG GS C S G S S + P A + ++ + H+P
Sbjct: 901 SSPSLSSQSPPSASGSPSGSGSTSHCDSGGTSSSSTPSTAQSPADAPMSPELPKPHLP 958
>BC132861-1|AAI32862.1| 276|Homo sapiens hypothetical protein
LOC339524 protein.
Length = 276
Score = 30.7 bits (66), Expect = 6.9
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = +1
Query: 169 PTSDPLRGQNPDEVGGL-PRSTLQPDG---AAHPKDAQPTEPSRRIEGSETSAVSVRQPV 336
P++ P G+ P GG PR G AA P RR G A P
Sbjct: 84 PSASPRSGRGPGRGGGRRPRLGAARSGCPGAAAAGGPAVLHPWRRAGGRVRGA----SPP 139
Query: 337 GPPRRCRWCPGIPRWTRTSLPGRDAIHRRPVALITP 444
P+ R P RW+ + +PG +I+ P++ P
Sbjct: 140 QGPQTARGFPLPSRWSSSPIPGCISIYPSPISFAHP 175
>BC126240-1|AAI26241.1| 276|Homo sapiens hypothetical protein
LOC339524 protein.
Length = 276
Score = 30.7 bits (66), Expect = 6.9
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = +1
Query: 169 PTSDPLRGQNPDEVGGL-PRSTLQPDG---AAHPKDAQPTEPSRRIEGSETSAVSVRQPV 336
P++ P G+ P GG PR G AA P RR G A P
Sbjct: 84 PSASPRSGRGPGRGGGRRPRLGAARSGCPGAAAAGGPAVLHPWRRAGGRVRGA----SPP 139
Query: 337 GPPRRCRWCPGIPRWTRTSLPGRDAIHRRPVALITP 444
P+ R P RW+ + +PG +I+ P++ P
Sbjct: 140 QGPQTARGFPLPSRWSSSPIPGCISIYPSPISFAHP 175
>BC042202-1|AAH42202.1| 384|Homo sapiens AKNA protein protein.
Length = 384
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 135 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 209 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 260
>BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein.
Length = 134
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 286 RRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSL 396
R +EG + S VRQPV P R R PG PR + +L
Sbjct: 96 RALEGPQGSEGQVRQPVLPGVRERRVPGQPRRRKAAL 132
>BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adaptor
molecule 1 protein.
Length = 670
Score = 30.7 bits (66), Expect = 6.9
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 205 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 333
E+GGLPR++ +P+ + P K QP P R+ E SAV R P
Sbjct: 325 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 370
>AY703044-1|AAU34191.1| 1358|Homo sapiens AKNA transcript E protein.
Length = 1358
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 135 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1183 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1234
>AY703043-1|AAU34190.1| 1439|Homo sapiens AKNA transcript D protein.
Length = 1439
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 135 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1264 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1315
>AY703040-1|AAU34187.1| 1364|Homo sapiens AKNA transcript B1 protein.
Length = 1364
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 135 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1189 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1240
>AY703039-1|AAU34186.1| 1320|Homo sapiens AKNA transcript A protein.
Length = 1320
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 135 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1145 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1196
>AY560599-1|AAS72997.1| 863|Homo sapiens ADAM15 isoform 6b protein.
Length = 863
Score = 30.7 bits (66), Expect = 6.9
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 99 VVSRPRAQGF*DPPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSP 257
VV P++QG PP R P P R P PG G G + +R P
Sbjct: 803 VVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPPP 855
>AY560598-1|AAS72996.1| 862|Homo sapiens ADAM15 isoform 6a protein.
Length = 862
Score = 30.7 bits (66), Expect = 6.9
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 99 VVSRPRAQGF*DPPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSP 257
VV P++QG PP R P P R P PG G G + +R P
Sbjct: 802 VVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPPP 854
>AY560597-1|AAS72995.1| 838|Homo sapiens ADAM15 isoform 5 protein.
Length = 838
Score = 30.7 bits (66), Expect = 6.9
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 99 VVSRPRAQGF*DPPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSP 257
VV P++QG PP R P P R P PG G G + +R P
Sbjct: 778 VVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPPP 830
>AL356796-6|CAI16862.2| 1439|Homo sapiens AT-hook transcription factor
protein.
Length = 1439
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 135 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1264 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1315
>AL356796-5|CAM23638.1| 1358|Homo sapiens AT-hook transcription factor
protein.
Length = 1358
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 135 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1183 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1234
>AL356796-4|CAI16861.1| 899|Homo sapiens AT-hook transcription
factor protein.
Length = 899
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 135 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 724 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 775
>AK131082-1|BAC85132.1| 1495|Homo sapiens FLJ00281 protein protein.
Length = 1495
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 135 PPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
PP L C L V SPP ++ + A TTRR+ S P + +A
Sbjct: 1293 PPADTLQCPLCGQVGSPPEADGPGSATSGAEKATTRRKASSTPSPKQRSKQA 1344
>AK123670-1|BAC85673.1| 276|Homo sapiens protein ( Homo sapiens
cDNA FLJ41676 fis, clone HCASM2002502. ).
Length = 276
Score = 30.7 bits (66), Expect = 6.9
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = +1
Query: 169 PTSDPLRGQNPDEVGGL-PRSTLQPDG---AAHPKDAQPTEPSRRIEGSETSAVSVRQPV 336
P++ P G+ P GG PR G AA P RR G A P
Sbjct: 84 PSASPRSGRGPGRGGGRRPRLGAARSGCPGAAAAGGPAVLHPWRRAGGRVRGA----SPP 139
Query: 337 GPPRRCRWCPGIPRWTRTSLPGRDAIHRRPVALITP 444
P+ R P RW+ + +PG +I+ P++ P
Sbjct: 140 QGPQTARGFPLPSRWSSSPIPGCISIYPSPISFAHP 175
>AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1
protein.
Length = 718
Score = 30.7 bits (66), Expect = 6.9
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 205 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 333
E+GGLPR++ +P+ + P K QP P R+ E SAV R P
Sbjct: 373 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 418
>AF314227-5|AAS48593.1| 838|Homo sapiens ADAM15 isoform 5 protein.
Length = 838
Score = 30.7 bits (66), Expect = 6.9
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 99 VVSRPRAQGF*DPPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSP 257
VV P++QG PP R P P R P PG G G + +R P
Sbjct: 778 VVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPPP 830
>AF314227-4|AAS48594.1| 862|Homo sapiens ADAM15 isoform 6a protein.
Length = 862
Score = 30.7 bits (66), Expect = 6.9
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 99 VVSRPRAQGF*DPPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSP 257
VV P++QG PP R P P R P PG G G + +R P
Sbjct: 802 VVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPPP 854
>AF314227-2|AAS48595.1| 863|Homo sapiens ADAM15 isoform 6b protein.
Length = 863
Score = 30.7 bits (66), Expect = 6.9
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 99 VVSRPRAQGF*DPPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSP 257
VV P++QG PP R P P R P PG G G + +R P
Sbjct: 803 VVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPPP 855
>AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor
candidate region protein 1 protein.
Length = 1509
Score = 30.7 bits (66), Expect = 6.9
Identities = 28/84 (33%), Positives = 34/84 (40%)
Frame = +1
Query: 151 SPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQ 330
+PA P + PL+G P LP D + H PT P R S +VS R
Sbjct: 706 APAPQIPAAAPLKGPGPSSSPSLPHQAPLGD-SPHLPSPHPTRPPSR-PPSRPQSVS-RP 762
Query: 331 PVGPPRRCRWCPGIPRWTRTSLPG 402
P PP CP P +LPG
Sbjct: 763 PSEPP--LHPCP--PPQAPPTLPG 782
>AB209157-1|BAD92394.1| 859|Homo sapiens ADAM15 isoform 6a variant
protein.
Length = 859
Score = 30.7 bits (66), Expect = 6.9
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 99 VVSRPRAQGF*DPPTKRLPCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSP 257
VV P++QG PP R P P R P PG G G + +R P
Sbjct: 799 VVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPPP 851
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 26.6 bits (56), Expect(2) = 7.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 420 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 334
+V + PT Q AG GP+G A SG PD
Sbjct: 1829 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 1858
Score = 22.2 bits (45), Expect(2) = 7.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 351 PSGRPDGLPYRDG 313
PSG P G PY G
Sbjct: 1879 PSGEPPGTPYFSG 1891
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 26.6 bits (56), Expect(2) = 8.6
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 420 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 334
+V + PT Q AG GP+G A SG PD
Sbjct: 52 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 81
Score = 22.2 bits (45), Expect(2) = 8.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 351 PSGRPDGLPYRDG 313
PSG P G PY G
Sbjct: 102 PSGEPPGTPYFSG 114
>DQ421853-1|ABD77575.1| 500|Homo sapiens synaptojanin 1 protein.
Length = 500
Score = 30.3 bits (65), Expect = 9.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = +1
Query: 115 GPKDFRTHPLNDSPALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRI 294
GP ++ P++ PA P DP + P PR P A P+ +P PS R
Sbjct: 57 GPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP-PRPVAPPTRPAPPQ--RPPPPSGRS 113
Query: 295 EGSETSAVSVRQPVG 339
+ S + ++ P G
Sbjct: 114 QPSPQAGLAGPGPAG 128
>BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein.
Length = 132
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +1
Query: 343 PRRCRWCPGIPRWT--RTSLPGR 405
P RC W PG P T RT+ PGR
Sbjct: 106 PSRCAWSPGFPITTPSRTAFPGR 128
>BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 9.1
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 238 PDGAAHPKDAQP--TEPSRRIEGSETSAVSVRQPVGPPRR 351
P A P+ +P + PS R++ S +A P GPPRR
Sbjct: 29 PRQAGRPRHPRPRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 9.1
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 238 PDGAAHPKDAQP--TEPSRRIEGSETSAVSVRQPVGPPRR 351
P A P+ +P + PS R++ S +A P GPPRR
Sbjct: 29 PRQAGRPRHPRPRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein.
Length = 1321
Score = 30.3 bits (65), Expect = 9.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 465 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 343
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein.
Length = 990
Score = 30.3 bits (65), Expect = 9.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 465 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 343
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein
protein.
Length = 1335
Score = 30.3 bits (65), Expect = 9.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 465 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 343
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 734 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 773
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,560,232
Number of Sequences: 237096
Number of extensions: 2756043
Number of successful extensions: 11187
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 9150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11103
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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