Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_B10
         (830 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-33...    31   1.5  
07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758     29   3.4  
05_02_0116 + 6773659-6774437,6775103-6775298,6775381-6775565,677...    28   7.9  

>01_01_0047 +
           334809-334877,334966-335074,335159-335299,336337-336498,
           336577-336734,337180-337310,337385-337472,337587-337690,
           338346-338444,339060-339116,339262-339337,339519-339602,
           339969-340010,340128-340198,341516-341564,342370-342441,
           343149-343286,343393-343473,344166-344353,344591-345188,
           345274-345342,346729-346854,347048-347175,347986-348142,
           348342-348388,348472-348535,348691-348765,349292-349414,
           349797-349982,351179-351303,351390-351459,351974-352101,
           352585-352726,353065-353163,353239-353285,353598-353652,
           353758-353967,354686-354757,354836-354905,355231-355414,
           355521-355644,355732-355863,356252-356317,356805-356852,
           357572-357676,357728-357865,358097-358399,358482-358594,
           359082-359148,359236-359310,359395-359517,359610-359618,
           360156-360320,360401-360502,361545-361696,361794-361995,
           362079-362126,362215-362298,362613-362657,363302-363385,
           363890-363970,364044-364133,364217-364279,364824-364841,
           365238-365378,365494-365550,366091-366185,366275-366383,
           367067-367156,367308-367387,367480-367558,367742-367903,
           368005-368136,368335-368469,368553-368618,369317-369457,
           369575-369648,369685-369910
          Length = 2905

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 57  ILYSLTWRRVNIARSQAVLLEKCRHLDSS 143
           +LY+L  + VNI   QA+LLE C ++ +S
Sbjct: 827 VLYNLADKEVNIKVGQAILLELCTNISAS 855


>07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758
          Length = 223

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = -2

Query: 595 PTSPTALSPSVALGPTNKFMFEWRTAPMPAIEPDLRREPFSQISGPKVSFATPYDAFVA 419
           P+SP++ SPS        F+    ++  P   P  R    S ++ P+   A+P  A VA
Sbjct: 45  PSSPSSSSPSTPTAAGLSFLSSPGSSASPNPAPRSRSSRRSPLASPRTGTASPLSAAVA 103


>05_02_0116 +
           6773659-6774437,6775103-6775298,6775381-6775565,
           6775746-6776079,6776174-6776378,6776692-6776834,
           6777081-6777233
          Length = 664

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 20/67 (29%), Positives = 27/67 (40%)
 Frame = +3

Query: 321 GRIVPVSSMTVASCCA*MLVSSTIDSIISRSHMATNASYGVAKETFGPLIWENGSRLKSG 500
           GR+ PVS +  +        S +  S   R        Y    E FGPLI+ + S    G
Sbjct: 33  GRLSPVSPLVHSRLPTPTSSSGSSGSAPPRPARRGGGDYHGVGEGFGPLIYTSCSSSAGG 92

Query: 501 SIAGIGA 521
              G+GA
Sbjct: 93  GGGGVGA 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,665,952
Number of Sequences: 37544
Number of extensions: 399095
Number of successful extensions: 1142
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)