Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_B10
         (830 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AL031624-2|CAA20942.1|  244|Caenorhabditis elegans Hypothetical ...    28   7.1  
U80450-11|AAM15595.1|  664|Caenorhabditis elegans Temporarily as...    28   9.4  
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass...    28   9.4  
U80450-8|AAK77616.1|  949|Caenorhabditis elegans Temporarily ass...    28   9.4  
AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical...    28   9.4  

>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
           protein F45G2.2a protein.
          Length = 1235

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 220 TEYWCTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNT 107
           TE W      F   GFS +   D ++L S  +H  N+T
Sbjct: 319 TEEWQITDGAFNVMGFSEREKDDLYKLCSAIMHIGNST 356


>Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical
           protein T07D10.3 protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 338 LQHDRCQLLCVNVGFLDYR 394
           L+H  CQL C  V F DY+
Sbjct: 111 LEHQSCQLFCCGVRFSDYK 129


>AL031624-2|CAA20942.1|  244|Caenorhabditis elegans Hypothetical
           protein H16D19.3 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 338 LQHDRCQLLCVNVGFLDYR 394
           L+H  CQL C  V F DY+
Sbjct: 99  LEHQSCQLFCCGVRFSDYK 117


>U80450-11|AAM15595.1|  664|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 163, isoform d protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +3

Query: 420 ATNASYGVAKET---FGPLIWENGSRLKSGSIAGIGAVLHSNINLLVGPSAT 566
           ++  S+ V++ T   F PL++ NG R  SG  AG G   H+  + +   SA+
Sbjct: 588 SSTPSFPVSRATPLPFHPLLYNNGERGGSGHAAGGGGGGHNGYSTMNNRSAS 639


>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 163, isoform a protein.
          Length = 1112

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +3

Query: 420 ATNASYGVAKET---FGPLIWENGSRLKSGSIAGIGAVLHSNINLLVGPSAT 566
           ++  S+ V++ T   F PL++ NG R  SG  AG G   H+  + +   SA+
Sbjct: 588 SSTPSFPVSRATPLPFHPLLYNNGERGGSGHAAGGGGGGHNGYSTMNNRSAS 639


>U80450-8|AAK77616.1|  949|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 163, isoform c protein.
          Length = 949

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +3

Query: 420 ATNASYGVAKET---FGPLIWENGSRLKSGSIAGIGAVLHSNINLLVGPSAT 566
           ++  S+ V++ T   F PL++ NG R  SG  AG G   H+  + +   SA+
Sbjct: 588 SSTPSFPVSRATPLPFHPLLYNNGERGGSGHAAGGGGGGHNGYSTMNNRSAS 639


>AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical
           protein Y53F4B.25 protein.
          Length = 603

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -3

Query: 597 IPPHRRLFRPLWR*GQLINLCLNGERRQCLQSNLI*GENRSPKLVVQRFLS 445
           I PH+ ++ PL    Q ++LC   +R   L  NL   +  + K +V  FL+
Sbjct: 471 IVPHQPMYVPLINPNQKLDLCCRKQRISPLCQNLCNFDTFNDKTLVAAFLT 521


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,553,574
Number of Sequences: 27780
Number of extensions: 324495
Number of successful extensions: 729
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)