Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_B06
         (789 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK024427-1|BAB15717.1|  349|Homo sapiens FLJ00016 protein protein.     31   3.6  

>AK024427-1|BAB15717.1|  349|Homo sapiens FLJ00016 protein protein.
          Length = 349

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 9/52 (17%)
 Frame = -1

Query: 726 VSEHPFHSCILHLFPARFHI---------SPXPVQPCCCGCSASRDVNLYIF 598
           +S+   +SC L LFP R  +         SP P Q  CCG     D NL I+
Sbjct: 138 LSQTALYSCSLGLFPNRVRLLGWAWLTWGSPLPPQWSCCGARGPNDWNLNIY 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,570,220
Number of Sequences: 237096
Number of extensions: 2111434
Number of successful extensions: 3638
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3638
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)