Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_B01
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...    87   1e-17

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 43/103 (41%), Positives = 58/103 (56%)
 Frame = -2

Query: 624 ASEATLXNMLNISPFSYGLVVKQVYDXGTIFAPEIXDIKPEDXRAKFQXXXXXXXXXXXA 445
           ASE+ L NML ++PFSYGLVV+QVYD GT++ PE+ D+  E+ R +F            A
Sbjct: 169 ASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLA 228

Query: 444 IGYPXIXSAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKD 316
           + YP + S  HS+ANG +N+L               IK FI D
Sbjct: 229 VNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIAD 271



 Score = 37.5 bits (83), Expect = 0.010
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = -3

Query: 725 TFFXQXXFIPTXISKGTXGIIXDVHIXKPGDK 630
           T F Q   IPT I++GT  I+ DVH+ K GDK
Sbjct: 135 TSFFQALQIPTKIARGTIEILNDVHLIKEGDK 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,382,084
Number of Sequences: 27780
Number of extensions: 146049
Number of successful extensions: 229
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)