Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_A19
(766 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ470474-1|ABF00125.1| 747|Homo sapiens scaffold attachment fac... 60 1e-08
BC027713-1|AAH27713.1| 804|Homo sapiens heterogeneous nuclear r... 58 5e-08
BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein. 58 5e-08
BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein. 58 5e-08
BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear r... 58 5e-08
AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated pr... 58 5e-08
X65488-1|CAA46472.1| 806|Homo sapiens hnRNP U protein protein. 55 2e-07
BX323046-7|CAI11058.1| 806|Homo sapiens heterogeneous nuclear r... 55 2e-07
BX323046-6|CAI11057.1| 723|Homo sapiens heterogeneous nuclear r... 55 2e-07
BX323046-5|CAI11056.1| 242|Homo sapiens heterogeneous nuclear r... 55 2e-07
BX323046-4|CAI11055.1| 549|Homo sapiens heterogeneous nuclear r... 55 2e-07
BC034925-1|AAH34925.1| 520|Homo sapiens Similar to heterogeneou... 55 2e-07
BC024767-1|AAH24767.1| 806|Homo sapiens heterogeneous nuclear r... 55 2e-07
BC015782-1|AAH15782.1| 722|Homo sapiens HNRPU protein protein. 55 2e-07
BC007950-1|AAH07950.2| 705|Homo sapiens HNRPU protein protein. 55 2e-07
BC003621-1|AAH03621.1| 806|Homo sapiens heterogeneous nuclear r... 55 2e-07
BC003367-1|AAH03367.1| 806|Homo sapiens heterogeneous nuclear r... 55 2e-07
AF068846-1|AAC19382.1| 824|Homo sapiens scaffold attachment fac... 55 2e-07
AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens ... 49 2e-05
X70649-1|CAA49992.1| 740|Homo sapiens member of DEAD box protei... 44 5e-04
EF418571-1|ABN70941.1| 740|Homo sapiens DEAD box polypeptide 1 ... 44 5e-04
EF418570-1|ABN70940.1| 740|Homo sapiens DEAD box polypeptide 1 ... 44 5e-04
BC053673-1|AAH53673.1| 740|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 5e-04
BC012132-1|AAH12132.1| 740|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 5e-04
BC130632-1|AAI30633.1| 1314|Homo sapiens ring finger protein 123... 31 6.0
AY744152-1|AAU93470.1| 1314|Homo sapiens ubiquitin ligase protein. 31 6.0
>DQ470474-1|ABF00125.1| 747|Homo sapiens scaffold attachment factor
A2 protein.
Length = 747
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = -2
Query: 417 EKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 241
E DV+G + + E+E +S++ NG LG AF + +L DR L PHVL KN ++NFG
Sbjct: 357 ENDVIGCFANFETEEVELSFSKNGEDLGVAFWISKDSLADRALLPHVLCKNCVVELNFG 415
Score = 47.6 bits (108), Expect = 5e-05
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = -1
Query: 544 IRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGKS 422
+R+GWS D S LGE E S+GF+ G NG+++E+G++
Sbjct: 314 LRVGWSVDFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQT 354
>BC027713-1|AAH27713.1| 804|Homo sapiens heterogeneous nuclear
ribonucleoprotein U-like 1 protein.
Length = 804
Score = 57.6 bits (133), Expect = 5e-08
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -2
Query: 417 EKDVVGAYLDLESEPCV-VSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 241
E DV+G + D E V +S+T NG +G AF + ALG + LYPHVL KN + NFG
Sbjct: 325 ENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 384
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 544 IRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYG 428
+RIGWS D S LGE S+G+ TG+ N ++ YG
Sbjct: 282 VRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYG 320
>BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 57.6 bits (133), Expect = 5e-08
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -2
Query: 417 EKDVVGAYLDLESEPCV-VSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 241
E DV+G + D E V +S+T NG +G AF + ALG + LYPHVL KN + NFG
Sbjct: 225 ENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 284
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 544 IRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYG 428
+RIGWS D S LGE S+G+ TG+ N ++ YG
Sbjct: 182 VRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYG 220
>BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 57.6 bits (133), Expect = 5e-08
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -2
Query: 417 EKDVVGAYLDLESEPCV-VSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 241
E DV+G + D E V +S+T NG +G AF + ALG + LYPHVL KN + NFG
Sbjct: 225 ENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 284
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 544 IRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYG 428
+RIGWS D S LGE S+G+ TG+ N ++ YG
Sbjct: 182 VRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYG 220
>BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear
ribonucleoprotein U-like 1 protein.
Length = 856
Score = 57.6 bits (133), Expect = 5e-08
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -2
Query: 417 EKDVVGAYLDLESEPCV-VSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 241
E DV+G + D E V +S+T NG +G AF + ALG + LYPHVL KN + NFG
Sbjct: 325 ENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 384
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 544 IRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYG 428
+RIGWS D S LGE S+G+ TG+ N ++ YG
Sbjct: 282 VRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYG 320
>AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated
protein protein.
Length = 856
Score = 57.6 bits (133), Expect = 5e-08
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -2
Query: 417 EKDVVGAYLDLESEPCV-VSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 241
E DV+G + D E V +S+T NG +G AF + ALG + LYPHVL KN + NFG
Sbjct: 325 ENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 384
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 544 IRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYG 428
+RIGWS D S LGE S+G+ TG+ N ++ YG
Sbjct: 282 VRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYG 320
>X65488-1|CAA46472.1| 806|Homo sapiens hnRNP U protein protein.
Length = 806
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 374 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 433
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 434 CAVEFNFG 441
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 333 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 379
>BX323046-7|CAI11058.1| 806|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 806
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 374 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 433
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 434 CAVEFNFG 441
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 333 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 379
>BX323046-6|CAI11057.1| 723|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 723
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 291 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 350
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 351 CAVEFNFG 358
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 250 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 296
>BX323046-5|CAI11056.1| 242|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 242
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 170 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 229
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 230 CAVEFNFG 237
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 129 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 175
>BX323046-4|CAI11055.1| 549|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 549
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 117 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 176
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 177 CAVEFNFG 184
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 76 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 122
>BC034925-1|AAH34925.1| 520|Homo sapiens Similar to heterogeneous
nuclear ribonucleoprotein U (scaffold attachment facto
protein.
Length = 520
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 88 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 147
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 148 CAVEFNFG 155
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 47 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 93
>BC024767-1|AAH24767.1| 806|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 806
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 374 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 433
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 434 CAVEFNFG 441
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 333 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 379
>BC015782-1|AAH15782.1| 722|Homo sapiens HNRPU protein protein.
Length = 722
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 290 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 349
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 350 CAVEFNFG 357
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 249 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 295
>BC007950-1|AAH07950.2| 705|Homo sapiens HNRPU protein protein.
Length = 705
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 273 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 332
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 333 CAVEFNFG 340
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 232 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 278
>BC003621-1|AAH03621.1| 806|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 806
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 374 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 433
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 434 CAVEFNFG 441
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 333 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 379
>BC003367-1|AAH03367.1| 806|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 806
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 374 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 433
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 434 CAVEFNFG 441
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 333 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 379
>AF068846-1|AAC19382.1| 824|Homo sapiens scaffold attachment factor
A protein.
Length = 824
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 441 TKNMGN-LNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKN 265
T++ G +E DV+ + + ES+ +SY NG LG AF+ + L R L+PHVL N
Sbjct: 392 TEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHN 451
Query: 264 MCYKVNFG 241
+ NFG
Sbjct: 452 CAVEFNFG 459
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1
Query: 565 KDALTSGIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
KD +RIGWS S + LGE E S+G+ G N E ++YG+
Sbjct: 351 KDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGE 397
>AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens
cDNA FLJ45114 fis, clone BRAWH3034775, highly similar
to Homo sapiens E1B-55kDa-associated protein 5
(E1B-AP5). ).
Length = 752
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -2
Query: 366 VSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 241
+S+T NG +G AF + ALG + LYPHVL KN + NFG
Sbjct: 229 LSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 270
>X70649-1|CAA49992.1| 740|Homo sapiens member of DEAD box protein
family protein.
Length = 740
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = -2
Query: 411 DVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYER 232
D +G YLD++ V ++ NG LG AFE P + ++ L+P + KN K NFG E
Sbjct: 190 DTIGCYLDIDKGH--VKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEEE 246
Query: 231 YNMLSKTKIV 202
+ K V
Sbjct: 247 FKFPPKDGFV 256
Score = 40.7 bits (91), Expect = 0.006
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -1
Query: 541 RIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
R+GWST +SL LG + +GF TG+ +N ++ YG+
Sbjct: 146 RVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGE 184
>EF418571-1|ABN70941.1| 740|Homo sapiens DEAD box polypeptide 1
protein.
Length = 740
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = -2
Query: 411 DVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYER 232
D +G YLD++ V ++ NG LG AFE P + ++ L+P + KN K NFG E
Sbjct: 190 DTIGCYLDIDKGH--VKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEEE 246
Query: 231 YNMLSKTKIV 202
+ K V
Sbjct: 247 FKFPPKDGFV 256
Score = 40.7 bits (91), Expect = 0.006
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -1
Query: 541 RIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
R+GWST +SL LG + +GF TG+ +N ++ YG+
Sbjct: 146 RVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGE 184
>EF418570-1|ABN70940.1| 740|Homo sapiens DEAD box polypeptide 1
protein.
Length = 740
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = -2
Query: 411 DVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYER 232
D +G YLD++ V ++ NG LG AFE P + ++ L+P + KN K NFG E
Sbjct: 190 DTIGCYLDIDKGH--VKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEEE 246
Query: 231 YNMLSKTKIV 202
+ K V
Sbjct: 247 FKFPPKDGFV 256
Score = 40.7 bits (91), Expect = 0.006
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -1
Query: 541 RIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
R+GWST +SL LG + +GF TG+ +N ++ YG+
Sbjct: 146 RVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGE 184
>BC053673-1|AAH53673.1| 740|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 1 protein.
Length = 740
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = -2
Query: 411 DVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYER 232
D +G YLD++ V ++ NG LG AFE P + ++ L+P + KN K NFG E
Sbjct: 190 DTIGCYLDIDKGH--VKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEEE 246
Query: 231 YNMLSKTKIV 202
+ K V
Sbjct: 247 FKFPPKDGFV 256
Score = 40.7 bits (91), Expect = 0.006
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -1
Query: 541 RIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
R+GWST +SL LG + +GF TG+ +N ++ YG+
Sbjct: 146 RVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGE 184
>BC012132-1|AAH12132.1| 740|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 1 protein.
Length = 740
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = -2
Query: 411 DVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYER 232
D +G YLD++ V ++ NG LG AFE P + ++ L+P + KN K NFG E
Sbjct: 190 DTIGCYLDIDKGH--VKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEEE 246
Query: 231 YNMLSKTKIV 202
+ K V
Sbjct: 247 FKFPPKDGFV 256
Score = 40.7 bits (91), Expect = 0.006
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -1
Query: 541 RIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGK 425
R+GWST +SL LG + +GF TG+ +N ++ YG+
Sbjct: 146 RVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGE 184
>BC130632-1|AAI30633.1| 1314|Homo sapiens ring finger protein 123
protein.
Length = 1314
Score = 30.7 bits (66), Expect = 6.0
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 411 DVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHV-LTKNMCYKVNFG 241
D+V +DL+ +S+ LNG LGTAFE LG +P + L+ NFG
Sbjct: 196 DIVSCLIDLDDG--TLSFCLNGVSLGTAFENLSRGLG-MAYFPAISLSFKESVAFNFG 250
>AY744152-1|AAU93470.1| 1314|Homo sapiens ubiquitin ligase protein.
Length = 1314
Score = 30.7 bits (66), Expect = 6.0
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 411 DVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHV-LTKNMCYKVNFG 241
D+V +DL+ +S+ LNG LGTAFE LG +P + L+ NFG
Sbjct: 196 DIVSCLIDLDDG--TLSFCLNGVSLGTAFENLSRGLG-MAYFPAISLSFKESVAFNFG 250
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,145,563
Number of Sequences: 237096
Number of extensions: 1687535
Number of successful extensions: 4107
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4107
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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